Arbovirus researchers unite: expanding genomic surveillance for an urgent global need

Gabriel Luz Wallau Author links open overlay panelNgu Njei Abanda, Adriano Abbud, Saro Abdella, Adugna Abera, Steve Ahuka-Mundeke, Francesca Falconi-Agapito, Kalichamy Alagarasu, Kevin K Ariën, Constancia Flávia Junqueira Ayres, Luisa Barzon, Joseph Humphrey Kofi Bonney, Sanaba Boumbaly, Philippe Buchy, Van-Mai Cao-Lormeau, Yu Kie Chem, Paul A Cardenas, Andres E Castillo, Adriana Delfraro, Gregor Devine, Veasna Duong, Myrielle Dupont-Rouzeyrol, Artem V Fadeev, Alvaro Fajardo, Luis Adrián Diaz, Lara Ferrero Gómez, Eduardo Samo Gudo, Gladys Gutierrez-Bugallo, Hapuarachchige Chanditha Hapuarachchi, Jean-Michel Heraud, Martin L Hibberd, Osvaldo Frederico Inlamea, Nik Jasmin, Kalysbek Kydyshov, Maria Ezekiely Kelly, Salim Khan, Andrey B Komissarov, Pornsawan Leaungwutiwong, Mariana Leguia, Yaniv Lustig, Rafael Maciel-de-Freitas, Gathsaurie Neelika Malavige, Alexander A Martinez, Maria L Mendoza, Luong T Mo, Brechla Moreno, Lydia Mwasi, Felipe Gomes Naveca, Lee Ching NG, Richard Njouom, Mauricio Lacerda Nogueira, Francine Ntoumi, Nehemie Nzoyikorera, Barbara A Parra, Mauricio Vázquez Pichardo, Kristine Joy Ragual Privaldos, Ricardo Rivero, Alejandra María Rojas, Richard Steiner Salvato, R Tedjo Sasmono, Jonas Schmidt-Chanasit, Etienne Simon-Loriere, Ava Kristy Dy Sy, Michael Talledo-Albujar, Daniel Thakuma Tizhe, Usenbaev Nurbolot Toloshovich, Vi Thuy Tran, Cécile Troupin, John Timothy Kayiwa, Andrew van den Hurk, Nikolaos Vasilakis, Atsbeha Gebreegziabxier Weldemariam, Sophie Yacoub, Zainun Zaini, Gabriel Luz Wallau

The Lancet Global Health 2023-08-01 DOI : 10.1016/S2214-109X(23)00325-X

Characterization of soluble TLR2 and CD14 levels during acute dengue virus infection.

Upasani V, Ter Ellen BM, Sann S, Lay S, Heng S, Laurent D, Ly S, Duong V, Dussart P, Smit JM, Cantaert T, Rodenhuis-Zybert IA.

Heliyon. 2023 Jun 21;9(6):e17265. doi: 10.1016/j.heliyon.2023.e17265. eCollection 2023 Jun.

Construction and characterization of a new hepatitis C virus genotype 6a subgenomic replicon that is prone to render the sofosbuvir resistance.

Chaolun Liu, Mingzhe Guo, Lin Han, Jie Lu, Xiaogang Xiang, Qing Xie, Janin Nouhin, Veasna Duong, Yimin Tong, Jin Zhong

J Med Virol. 2023 Sep;95(9):e29103. doi: 10.1002/jmv.29103.

Detection and Phylogenetic Analysis of Contemporary H14N2 Avian Influenza A Virus in Domestic Ducks in Southeast Asia (Cambodia)

Jurre Y. Siegers, Michelle Wille, Sokhoun Yann, Songha Tok, Sarath Sin, Sokha Chea, Alice Porco, Sreyem Sours, Vutha Chim, Samban Chea, Kimtuo Chhel, Sothyra Tum, Sorn San, Peter Thielen, Vijaykrishna Dhanasekaran, Erik A. Karlsson

Emerging Microbes & Infections DOI: 10.1080/22221751.2023.2297552

Detection and Phylogenetic Analysis of Highly Pathogenic A/H5N1 Avian Influenza Clade 2.3.4.4b Virus in Chile, 2022

Pedro Jimenez-Bluhm, Jurre Y. Siegers, Shaoyuan Tan, Bridgett Sharp, Pamela Freiden, Magdalena Johow, Katherinne Orozco, Soledad Ruiz, Cecilia Baumberger, Pablo Galdames, Maria Antonieta Gonzalez, Camila Rojas, Erik A. Karlsson, Christopher Hamilton-West, Stacey Schultz-Cherry

Emerging Microbes & Infections https://www.tandfonline.com/doi/full/10.1080/22221751.2023.2220569

Detection of Clade 2.3.4.4b Avian Influenza A(H5N8) Virus in Cambodia, 2021

Kimberly M Edwards, Jurre Y Siegers, Xiaoman Wei, Ammar Aziz, Yi-Mo Deng, Sokhoun Yann, Chan Bun, Seng Bunnary, Leonard Izzard, Makara Hak, Peter Thielen, Sothyra Tum, Frank Wong, Nicola S Lewis, Joe James, Filip Claes, Ian G Barr, Vijaykrishna Dhanasekaran, Erik A Karlsson

Emerg Infect Dis. 2023 Jan;29(1):170-174. doi: 10.3201/eid2901.220934.

Human immunodeficiency virus 1 5′-leader mutations in plasma viruses before and after the development of reverse transcriptase inhibitor-resistance mutations

Janin Nouhin​, Philip Lei Tzou, Soo-Yon Rhee, Malaya K. Sahoo, Benjamin A. Pinsky​, Miri Krupkin, Joseph D. Puglisi, Elisabetta V. Puglisi, Robert W. Shafer

Journal of General Virology Published: 06 October 2023 https://doi.org/10.1099/jgv.0.001898

Inundative, Dry-Powder, Inhaled Measles Vaccination to Prevent Deaths of Young Children in War-torn Regions

Benjamin L Sievers, Robert E Sievers, Eric L Sievers 

Open Forum Infect Dis. 2023 Jun 5;10(6):ofad302. doi: 10.1093/ofid/ofad302. eCollection 2023 Jun.

Longitudinal comparison of bacterial pathogen seropositivity among wet market vendors in the Lao People’s Democratic Republic

Nilandone Senvanpan, Vilayouth Phimolsarnnousith, Sayaphet Rattanavong, Mayfong Mayxay, Daniel Reinharz, Amanda E Fine, Paul F Horwood, Philippe Dussart, Stuart D Blacksell, Mathieu Pruvot, Paul N Newton, Matthew T Robinson 

One Health. 2023 Aug 25:17:100618. doi: 10.1016/j.onehlt.2023.100618. eCollection 2023 Dec.

National dengue surveillance, Cambodia 2002-2020

Christina Yek, Yimei Li, Andrea R Pacheco, Chanthap Lon, Veasna Duong, Philippe Dussart, Katherine I Young, Sophana Chea, Sreyngim Lay, Somnang Man, Souv Kimsan, Chea Huch, Rithea Leang, Rekol Huy, Cara E Brook, Jessica E Manning

Bull World Health Organ. 2023 Sep 1;101(9):605-616. doi: 10.2471/BLT.23.289713. Epub 2023 Jul 5.

Neutralization of African enterovirus A71 genogroups by antibodies to canonical genogroups.

Volle R, Luo L, Razafindratsimandresy R, Sadeuh-Mba SA, Gouandjika-Valisache I, Horwood P, Duong V, Buchy P, Joffret ML, Huang Z, Duizer E, Martin J, Chakrabarti LA, Dussart P, Jouvenet N, Delpeyroux F, Bessaud M.

J Gen Virol. 2023 Nov;104(11). doi: 10.1099/jgv.0.001911.

Obesity Is Associated with an Impaired Baseline Repertoire of Anti-Influenza Virus Antibodies

Marwa Abd Alhadi, Lilach M. Friedman, Erik A. Karlsson, Liel Cohen-Lavi, Anat Burkovitz, Stacey Schultz-Cherry, Terry L. Noah, Samuel S. Weir, Lester M. Shulman, Melinda A. Beck, Tomer Hertz

Microbiology Spectrum 26 April 2023 DOI: https://doi.org/10.1128/spectrum.00010-23

One assay to test them all: Multiplex assays for expansion of respiratory virus surveillance

Narjis Boukli, Claude Flamand,  Kim Lay Chea, Leangyi Heng, Seangmai Keo, Kimhoung Sour, Sophea In, Panha Chhim, Bunthea Chhor, Lomor Kruy, Jelena D. M. Feenstra, Manoj Gandhi, Obiageli Okafor, Camilla Ulekleiv, Heidi Auerswald, Viseth Srey Horm and Erik A. Karlsson

Front. Med., 24 April 2023 doi.org/10.3389/fmed.2023.1161268

Side-by-side comparative study of the immunogenicity of the intramuscular and intradermal rabies post-exposure prophylaxis regimens in a cohort of suspected RABV exposed individuals

Heidi Auerswald, Alvino Maestri, Sothy Touch, Saraden In, Nisa Ya, Borita Heng, Valérie Bosch-Castells, Christele Augard, Céline    Petit, Philippe Dussart, Yiksing Peng, Tineke Cantaert, Sowath Ly

Clin Infect Dis. 2023 Jun 20;ciad304. doi: 10.1093/cid/ciad304

Small mammals at the edge of deforestation in Cambodia: Transient community dynamics and potential pathways to pathogen emergence

Mathieu Pruvot, Sokha Chea, Vibol Hul, Samat In, Vuthy Buor, Jill Lea Ramassamy, Caroline Fillieux, Seng Sek, Ratha Sor, Sela Ros, Sithun Nuon, Sovannary San, Yaren Ty, Marany Chao, SreyemSours, Sreyleap Torng, Unthyda 

Choeurn, Udam Hun, Sophorn Ton, Samnang Y, Sonara Phon, Lina Kuy, Amanda Fine, Philippe Dussart, Veasna Duong, Paul F. Horwood, Sarah H. Olson

One Earth, Available online 29 November 2023. 10.1016/j.oneear.2023.11.003

Uncovering the endemic circulation of rabies in Cambodia

Maylis Layan, Laurent Dacheux, Philippe Lemey, Kirstyn Brunker, Laurence Ma, Cécile Troupin, Philippe Dussart, Véronique Chevalier, James L. N. Wood, Sowath Ly, Veasna Duong, Hervé Bourhy, Simon Dellicour

Molecular Ecology 04 August 2023 DOI : 10.1111/mec.17087

A Look inside the Replication Dynamics of SARS-CoV-2 in Blyth’s Horseshoe Bat (Rhinolophus lepidus) Kidney Cells.

Heidi Auerswald, Dolyce H. W. Low, Jurre Y. Siegers, Teyputita Ou, Sonita Kol, Saraden In, Martin Linster, Yvonne C. F. Su, Ian H. Mendenhall, Veasna Duong, Gavin J. D. Smith, Erik A. Karlsson.

Microbiology Spectrum. American Society for Microbiology 0(0):e00449-22.

Accessibility to rabies centers and human rabies post-exposure prophylaxis rates in Cambodia: A Bayesian spatio-temporal analysis to identify optimal locations for future centers

Jerome N. Baron, Véronique Chevalier, Sowath Ly, Veasna Duong, Philippe Dussart, Didier Fontenille, Yik Sing Peng, Beatriz Martínez-López.

PLoS Negl Trop Dis. 2022;16(6):e0010494.

Cambodia achieved a high vaccination coverage for its population: A good example of a lower middle-income country

Ngoc Phuong Hong Tao, Dang Nguyen, Le Huu Nhat Minh, Veasna Duong, Chey Beaupha, Tareq Al Ahdal, Nguyen Tien Huy.

J Glob Health. 2022;12:03088.

Childhood encephalitis in the Greater Mekong region (the SouthEast Asia Encephalitis Project): a multicentre prospective study

Jean David Pommier, Chris Gorman, Yoann Crabol, Kevin Bleakley, Heng Sothy, Ky Santy, Huong Thi Thu Tran, Lam Van Nguyen, Em Bunnakea, Chaw Su Hlaing, Aye Mya Min Aye, Julien Cappelle, Magali Herrant, Patrice Piola, Bruno Rosset, Veronique Chevalier, Arnaud Tarantola, Mey Channa, Jerome Honnorat, Anne Laure Pinto, Sayaphet Rattanavong, Manivanh Vongsouvath, Mayfong Mayxay, Sommanikhone Phangmanixay, Khounthavy Phongsavath, Ommar Swe Tin, Latt Latt Kyaw, Htay Htay Tin, Kyaw Linn, Thi Mai Hung Tran, Philippe Pérot, Nguyen Thi Thu Thuy, Nguyen Hien, Phuc Huu Phan, Philippe Buchy, Philippe Dussart, Denis Laurent, Marc Eloit, Audrey Dubot-Pérès, Olivier Lortholary, Xavier de Lamballerie, Paul N Newton, Marc Lecuit; SEAe Consortium

Lancet Glob Health. 2022 Jul;10(7):e989-e1002.

Dengue virus NS1 protein conveys pro-inflammatory signals by docking onto high-density lipoproteins

Souheyla Benfrid, Kyu-Ho Park, Mariano Dellarole, James E Voss, Carole Tamietti, Gérard Pehau-Arnaudet, Bertrand Raynal, Sébastien Brûlé, Patrick England, Xiaokang Zhang, Anastassia Mikhailova, Milena Hasan, Marie-No€elle Ungeheuer, Stéphane Petres, Scott B Biering, Eva Harris, Anavaj Sakuntabhai, Philippe Buchy, Veasna Duong, Philippe Dussart, Fasséli Coulibaly, François Bontems, Felix A Rey, Marie Flamand.

EMBO reports. John Wiley & Sons, Ltd; 2022;n/a(n/a):e53600

Early Changes in Interferon Gene Expression and Antibody Responses Following Influenza Vaccination in Pregnant Women.

Raquel Giacomelli Cao, Lisa Christian, Zhaohui Xu, Lisa Jaramillo, Bennett Smith, Erik A Karlsson, Stacey Schultz Cherry, Asuncion Mejias, Octavio Ramilo.

The Journal of Infectious Diseases. 2022;225(2):341‑51.

Evaluation of Zika rapid tests as aids for clinical diagnosis and epidemic preparedness

Debi Boeras, Cheikh Tidiane Diagne, Jose L. Pelegrino, Marc Grandadam, Veasna Duong, Philippe Dussart, Paul Brey, Didye Ruiz, Marisa Adati, Annelies Wilder-Smith, Andrew K. Falconar, Claudia M. Romero, Maria Guzman, Nagwa Hasanin, Amadou Sall, Rosanna W. Peeling.

eClinicalMedicine. 2022;49:101478.

Household clustering supports a novel chemoprophylaxis trial design for a mosquito-borne viral disease

Hugh R. Watson, Veasna Duong, Sowath Ly, Marie Mandron, André M. Siqueira, Guilherme S. Ribeiro.

Int J Infect Dis. 2022;122:169‑73.

Living Safely With Bats: Lessons in Developing and Sharing a Global One Health Educational Resource

Martinez, S., A. Sullivan, E. Hagan, J. Goley, J. H. Epstein, K. J. Olival, K. Saylors, J. Euren, J. Bangura, S. Zikankuba, M. M. M. Mouiche, A. O. Camara, J. Desmond, A. Islam, T. Hughes, S. Wacharplusadee, V. Duong, N. T. T. Nga, B. Bird, T. Goldstein, D. Wolking, C. K. Johnson, J. A. Mazet, S. H. Olson, A. E. Fine, M. Valitutto, W. B. Karesh, P. Daszak, L. Francisco and PREDICT Consortium (2022).

Glob Health Sci Pract 10(6).

Pestilence and famine: Continuing down the vicious cycle with COVID-19

Sudipta Hyder, Rethy K. Chhem, Filip Claes, Erik Albert Karlsson.

PLOS Pathogens. Public Library of Science; 2022;18(10):e1010810.

Predicting the potential for zoonotic transmission and host associations for novel viruses

S. Pandit, S. J. Anthony, T. Goldstein, K. J. Olival, M. M. Doyle, N. R. Gardner, B. Bird, W. A. Smith, D. Wolking, K. Gilardi, C. Monagin, T. Kelly, M. Uhart, J. H. Epstein, C. Machalaba, M. K. Rostal, P. Dawson, E. Hagan, A. Sullivan, H. Li, A. A. Chmura, A. Latinne, C. Lange, T. O’Rourke, S. H. Olson, L. Keatts, A. P. Mendoza, A. Perez, C. Dejuste de Paula, D. Zimmerman, M. Valitutto, M. LeBreton, D. McIver, A. Islam, V. Duong, M. Mouiche, Z. Shi, P. Mulembakani, C. Kumakamba, M. Ali, N. Kebede, U. Tamoufe, S. Bel-Nono, A. Camara, J. Pamungkas, K. Coulibaly, E. Abu-Basha, J. Kamau, S. Silithammavong, J. Desmond, T. Hughes, E. Shiilegdamba, O. Aung, D. Karmacharya, J. Nziza, D. Ndiaye, A. Gbakima, Z. Sijali, S. Wacharapluesadee, E. Alandia Robles, B. Ssebide, G. Suzán, L. F. Aguirre, M. R. Solorio, T. N. Dhole, N. T. T. Nga, P. L. Hitchens, D. O. Joly, K. Saylors, A. Fine, S. Murray, W. Karesh, P. Daszak, J. A. K. Mazet, PREDICT Consortium, C. Dejuste de Paula, C. K. Johnson.

Commun Biol. 2022;5(1):844.

Presence of Recombinant Bat Coronavirus GCCDC1 in Cambodian Bats

Feng Zhu*, Veasna Duong*, Xiao Fang Lim, Vibol Hul, Tanu Chawla, Lucy Keatts, Tracey Goldstein, Alexandre Hassanin, Vuong Tan Tu, Philippe Buchy, October M. Sessions, Lin-Fa Wang, Philippe Dussart, Danielle E. Anderson.

Viruses. 2022;14(2):176.

Rapid Generation of In-House Serological Assays Is Comparable to Commercial Kits Critical for Early Response to Pandemics: A Case With SARS-CoV-2.

Heidi Auerswald, Chanreaksmey Eng, Sokchea Lay, Saraden In, Sokchea Eng, Hoa Thi My Vo, Charya Sith, Sokleaph Cheng, Gauthier Delvallez, Vann Mich, Ngy Meng, Ly Sovann, Kraing Sidonn, Jessica Vanhomwegen, Tineke Cantaert, Philippe Dussart, Veasna Duong, Erik A. Karlsson.

Front Med. 2022;9:864972.

Robust and Functional Immune Memory Up to 9 Months After SARS-CoV-2 Infection: A Southeast Asian Longitudinal Cohort

Hoa Thi My Vo*, Alvino Maestri*, Heidi Auerswald, Sopheak Sorn, Sokchea Lay, Heng Seng, Sotheary Sann, Nisa Ya, Polidy Pean, Philippe Dussart, Olivier Schwartz, Sovann Ly, Timothée Bruel, Sowath Ly, Veasna Duong, Erik A. Karlsson**, Tineke Cantaert**.

Frontiers in Immunology [En ligne]. 2022 [cité le 1 mars 2022];13.

Temporal patterns of functional anti-dengue antibodies in dengue infected individuals with different disease outcome or infection history.

Hoa Thi My Vo, Vinit Upasani, Heidi Auerswald, Sokchea Lay, Sotheary Sann, Axelle Vanderlinden, Sreymom Ken, Sopheak Sorn, Sowath Ly, Veasna Duong, Philippe Dussart, Tineke Cantaert.

Sci Rep. Nature Publishing Group; 2022;12(1):17863.

Zika vector competence data reveals risks of outbreaks: the contribution of the European ZIKAlliance project

Thomas Obadia, Gladys Gutierrez-Bugallo, Veasna Duong, Ana I. Nuñez, Rosilainy S. Fernandes, Basile Kamgang, Liza Hery, Yann Gomard, Sandra R. Abbo, Davy Jiolle, Uros Glavinic, Myrielle Dupont-Rouzeyrol, Célestine M. Atyame, Nicolas Pocquet, Sébastien Boyer, Catherine Dauga, Marie Vazeille, André Yébakima, Michael T. White, Constantianus J. M. Koenraadt, Patrick Mavingui, Anubis Vega-Rua, Eva Veronesi, Gorben P. Pijlman, Christophe Paupy, Núria Busquets, Ricardo Lourenço-de-Oliveira, Xavier De Lamballerie, Anna-Bella Failloux. Nat Commun.

Nature Publishing Group; 2022;13(1):4490.

An influenza A (H3N2) virus outbreak in the Kingdom of Cambodia during the COVID-19 pandemic of 2020

Y. Sovann, B. Sar, V. Kab, S. Yann, M. Kinzer, P. Raftery, R. Albalak, S. Patel, P. Long Hay, H. Seng, S. Um, S. Chin, D. Chau, A. Khalakdina, E. Karlsson, S. J. Olsen, J. A. Mott.

International Journal of Infectious Diseases. 2021;103:352 ; DOI: 10.1016/j.ijid.2020.11.178

A Novel SARS-CoV-2 Related Coronavirus in Bats from Cambodia

Delaune Deborah*, Vibol Hul*, Erik A. Karlsson*, Alexandre Hassanin, Tey Putita Ou, Artem Baidaliuk, Fabiana Gámbaro, Matthieu Prot, Vuong Tan Tu, Sokha Chea, Lucy Keatts, Jonna Mazet, Christine K. Johnson, Philippe Buchy, Philippe Dussart, Tracey Goldstein, Etienne Simon-Lorière**, and Veasna Duong**

Nat Communications ; 12,1 (2021), 6563 ; DOI:10.1038/s41467-021-26809-4

Antibody fucosylation predicts disease severity in secondary dengue infection

Stylianos Bournazos, Hoa Thi My Vo, Veasna Duong, Heidi Auerswald, Sowath Ly, Anavaj Sakuntabhai, Philippe Dussart, Tineke Cantaert**, Jeffrey V. Ravetch**

Science. American Association for the Advancement of Science; 2021;372(6546):11025. DOI: 10.1126/science.abc7303

Antigenic evolution of dengue viruses over 20 years

Leah C. Katzelnick, Ana Coello Escoto, Angkana T. Huang, Bernardo Garcia-Carreras, Nayeem Chowdhury, Irina Maljkovic Berry, Chris Chavez, Philippe Buchy, Veasna Duong, Philippe Dussart, Gregory Gromowski, Louis Macareo, Butsaya Thaisomboonsuk, Stefan Fernandez, Derek J. Smith, Richard Jarman, Stephen S. Whitehead, Henrik Salje, Derek A. T. Cummings.

Science. American Association for the Advancement of Science; 2021; DOI: 10.1126/science.abk0058

Assessment of inactivation procedures for SARS-CoV-2

Heidi Auerswald, Sokhoun Yann, Sokha Dul, Saraden In, Philippe Dussart, Nicholas J. Martin, Erik A. Karlsson, Jose A. Garcia-Rivera.

J Gen Virol. 2021; DOI: 10.1099/jgv.0.001539

Decoding the RNA viromes in rodent lungs provides new insight into the origin and evolutionary patterns of rodent-borne pathogens in Mainland Southeast Asia

Zhiqiang Wu, Yelin Han, Bo Liu, Hongying Li, Guangjian Zhu, Alice Latinne, Jie Dong, Lilin Sun, Haoxiang Su, Liguo Liu, Jiang Du, Siyu Zhou, Mingxing Chen, Anamika Kritiyakan, Sathaporn Jittapalapong, Kittipong Chaisiri, Phillipe Buchy, Veasna Duong, Jian Yang, Jinyong Jiang, Xiang Xu, Hongning Zhou, Fan Yang, David M. Irwin, Serge Morand, Peter Daszak, Jianwei Wang, Qi Jin

Microbiome. 2021; 9, 18. DOI: 10.1186/s40168-020-00965-z

Direct Infection of B Cells by Dengue Virus Modulates B Cell Responses in a Cambodian Pediatric Cohort

Vinit Upasani, Hoa Thi My Vo, Heidi Auerswald, Denis Laurent, Sothy Heng, Veasna Duong, Izabela A. Rodenhuis-Zybert, Philippe Dussart, Tineke Cantaert.

Front Immunol. 2021;11. DOI: 10.3389/fimmu.2020.594813

Genetic and Antigenic Characterization of an Influenza A(H3N2) Outbreak in Cambodia and the Greater Mekong Subregion during the COVID-19 Pandemic, 2020

Jurre Y. Siegers, Vijaykrishna Dhanasekaran, Ruopeng Xie, Yi-Mo Deng, Sarika Patel, Vanra Ieng, Jean Moselen, Heidi Peck, Ammar Aziz, Borann Sarr, Savuth Chin, Seng Heng, Asheena Khalakdina, Michael Kinzer, Darapheak Chau, Philomena Raftery, Veasna Duong, Ly Sovann, Ian G. Barr**, Erik A. Karlsson**

J Virol. 2021;95(24):e01267-21. DOI: 10.1128/JVI.01267-21

Human Infection with Avian Influenza A(H9N2) Virus, Cambodia, February 2021

Samnang Um, Jurre Y. Siegers, Borann Sar, Savuth Chin, Sarika Patel, Seng Bunnary, Makara Hak, Sothy Sor, Oum Sokhen, Seng Heng, Darapheak Chau, Tum Sothyra, Asheena Khalakdina, Joshua A. Mott, Sonja J. Olsen, Filip Claes, Ly Sovann, Erik A. Karlsson.

Emerg Infect Dis. 2021;27(10):27425. DOI: 10.3201/eid2710.211039

Kinetics of the SARS-CoV-2 antibody response and serological estimation of time since infection

Stéphane Pelleau, Tom Woudenberg, Jason Rosado, Françoise Donnadieu, Laura Garcia, Thomas Obadia, Soazic Gardais, Yasmine Elgharbawy, Aurelie Velay, Maria Gonzalez, Jacques Yves Nizou, Nizar Khelil, Konstantinos Zannis, Charlotte Cockram, Sarah Hélène Merkling, Annalisa Meola, Solen Kerneis, Benjamin Terrier, Jerome de Seze, Delphine Planas, Olivier Schwartz, François Dejardin, Stéphane Petres, Cassandre von Platen, Sandrine Fernandes Pellerin, Laurence Arowas, Louise Perrin de Facci, Darragh Duffy, Clíona Ní Cheallaigh, Jean Dunne, Niall Conlon, Liam Townsend, Veasna Duong, Heidi Auerswald, Laurie Pinaud, Laura Tondeur, Marija Backovic, Bruno Hoen, Arnaud Fontanet, Ivo Mueller, Samira Fafi-Kremer, Timothée Bruel, Michael White.

J Infect Dis. 2021;jiab375. DOI: 10.1093/infdis/jiab375

Longitudinal monitoring in Cambodia suggests higher circulation of alpha and betacoronaviruses in juvenile and immature bats of three species

Julien Cappelle, Neil Furey, Thavry Hoem, Tey Putita Ou, Thona Lim, Vibol Hul, Oudam Heng, Véronique Chevalier, Philippe Dussart, Veasna Duong.

Sci Rep. 2021;11(1):24145. DOI: 10.1038/s41598-021-03169-z

Mosquito Vector Competence for Japanese Encephalitis Virus

Heidi Auerswald, Pierre-Olivier Maquart, Véronique Chevalier, Sebastien Boyer.

Viruses. 2021;13(6):1154. DOI: 10.3390/v13061154

Neutralization of Dengue Virus Serotypes by Sera from Dengue-Infected Individuals Is Preferentially Directed to Heterologous Serotypes and Not against the Autologous Serotype Present in Acute Infection

Heidi Auerswald, Simone Kann, Leonard Klepsch, Janne Hülsemann, Ines Rudnik, Sebastian Schreiber, Philippe Buchy, Michael Schreiber. Viruses. 2021;13(10):1957. DOI: 10.3390/v13101957

Potential role of vector-mediated natural selection in dengue virus genotype/lineage replacements in two epidemiologically contrasted settings

Olivia O’Connor, Tey Putita Ou, Fabien Aubry, Stéphanie Dabo, Sylvie Russet, Dominique Girault, Saraden In, Marine Minier, Sebastian Lequime, Thavry Hoem, Sébastien Boyer, Philippe Dussart, Nicolas Pocquet, Valérie Burtet-Sarramegna, Louis Lambrechts**, Veasna Duong**, Myrielle Dupont-Rouzeyrol**

Emerging Microbes & Infections. Taylor & Francis; 2021;10(1):134657. DOI: 10.1080/22221751.2021.1944789

Ranking the risk of animal-to-human spillover for newly discovered viruses

Zoë L. Grange, Tracey Goldstein, Christine K. Johnson, Simon Anthony, Kirsten Gilardi, Peter Daszak, Kevin J. Olival, Tammie O’Rourke, Suzan Murray, Sarah H. Olson, Eri Togami, Gema Vidal, Expert Panel, Predict Consortium, Jonna A. K. Mazet.

PNAS. National Academy of Sciences; 2021;118(15). DOI: 10.1073/pnas.2002324118

Replication Variance of African and Asian Lineage Zika Virus Strains in Different Cell Lines, Mosquitoes and Mice

Tey Putita Ou*, Heidi Auerswald*, Saraden In, Borin Peng, Senglong Pang, Sébastien Boyer, Rithy Choeung, Myrielle Dupont-Rouzeyrol, Philippe Dussart**, Veasna Duong**

Microorganisms. Multidisciplinary Digital Publishing Institute; 2021;9(6):1250. DOI: 10.3390/microorganisms9061250

The continuing search for the origins of SARS-CoV-2

Erik A. Karlsson, Veasna Duong.

Cell. Elsevier; 2021;184(17):43734. DOI: 10.1016/j.cell.2021.07.035

The Ecology and Evolution of Japanese Encephalitis Virus

Peter Mulvey, Veasna Duong, Sebastien Boyer, Graham Burgess, David T. Williams, Philippe Dussart, Paul F. Horwood.

Pathogens. Multidisciplinary Digital Publishing Institute; 2021;10(12):1534. DOI: 10.3390/pathogens10121534

Publications in journals without Impact Factor in 2021

Socializing One Health: an innovative strategy to investigate social and behavioral risks of emerging viral threats

Karen Saylors, David J. Wolking, Emily Hagan, Stephanie Martinez, Leilani Francisco, Jason Euren, Sarah H. Olson, Maureen Miller, Amanda E. Fine, Nga Nguyen Thi Thanh, Phuc Tran Minh, Jusuf D. Kalengkongan, Ola Ababneh, Mustafa Ababneh, Jum Rafiah Abd Sukor, Mohd Lutfi Abdullah, Josefina Abedin, Ehab Abu-Basha, Mohamed Ahmed Ali, Junior Beal Akoundze, Joël Akpaki, Sief Addeen Al Hanandeh, Bilal Al Omari, Abdullah Al Shakil, Mohammad Borhan Al-Zghoul, Stephenie Ann Albart, Abdullah Alshammari, Basil H. Amarneh, William Ampofo, Victoria Andrew, Dao Le Anh, Ulaankhuu Ankhanbaatar, Simon Anthony, Ungke Antonjaya, Kidan Araya, Jallah Arku, Norsharina Arshat, Theodore Asigbee, Ohnmar Aung, Joseph Awuni, James Ayukebong, Mohammad Saifullah Mohd Azian, Nor Adilah Aziz, Aminata Ba, Ganzorig Baasan, Ola Bagato, Aboubacar Bamba, Djeneba Bamba, James Bangura, Ariunbaatar Barkhasbaatar, June Barrera, Cale Basaraba, Samuel Bel-Nono, Manjunatha Belaganahalli, Desalegn Belay, Jaber Belkhiria, Ridzki M. F. Binol, Brian Bird, Manisha Bista, Pitu Biswas, Matthew Blake, Linda Boatemaa, Margret Bonason, James Brandful, Joseph Brown, John Brownstein, Alpha Oumar Camara, Mamadi Camara, Salif Camara, Daniel Chai, Debapriyo Chakraborty, Hannah Chale, Ashok Chaudhary, Sokha Chea, Aleksei A. Chmura, Andrew Chow, Carolina Churchill, Abraham Commey, Emmanuel Couacy-Hymann, Julien Kalpy Coulibaly, Michael Cranfield, Wirda Damanik, Batchuluun Damdinjav, Norhidayah Danial, Peter Daszak, Runie David, Patrick Dawson, Ardjouma Dembele, Awa Deme, James Desmond, Aghnianditya Kresno Dewantari, Jasjeet Dhanota, Tapan Dhole, Nguyen Thi Diep, Aristide Dionkounda, Gaye Laye Diop, Kimberly Dodd, Otilia Dogbey, Tumendemberel Dorjnyam, Mireille Dosso, Kalil Doumbouya, Mohamed Idriss Doumbouya, Megan Doyle, Simone Dramou, Tracy Drazenovich, Dang Duc Anh, Bach Duc Luu, Prateep Duengkae, Vu Trong Duoc, Tran Nhu Duong, Veasna Duong, Huda Dursman, Philippe Dussart, Shusmita Dutta, Tan Jun Ee, Abel Ekiri, Amira S. El Rifay, Rabeh El Shesheny, Ahmed N. El Taweel, Zena Babu Emmanuel, Jonathan H. Epstein, Jason Euren, Tierra Smiley Evans, Alaa Fahmawi, Simeon Fahn, Yasha Feferholtz, Jinnat Ferdous, Amanda Fine, Meerjady Sabrina Flora, Leilani Francisco, Lem Fui Fui, Taylor Gabourie, Millawati Gani, Michael Garbo, Nicole Gardner, Aiah Gbakima, Marie Pelagie Atrou Gbamele, Xingyi Ge, Lee Heng Gee, Brooke Genovese, Alexandra Gibson, Kirsten Gilardi, Martin Gilbert, Amethyst Gillis, Andrew Ginsos, Privat Godji Gnabro, Tracey Goldstein, Mokhtar R. Gomaa, Jules Gomis, Kevin Gonzalez, Zoe Grange, Denise Greig, Michael Grodus, Kpon Kakeuma Romeo Gueu, Leticia Gutierrez, Dan Marcelin Haba, Emily Hagan, Abdul Hai, Suraya Hamid, Daniel K. Harris, Abdul Kadir Abu Hashim, Moushumi Hassan, Quaza Nizamuddin Hassan, Qun He, Thiravat Hemachudha, Helena Henry, Ronald Herbert, Zaidoun Hijazeen, Moukala Ndolo Hilarion, Rebecca Hill, Nguyen Thi Hoa, Paul Horwood, Md. Enayet Hossain, Saddam Hossain, Moh Moh Htun, Ben Hu, Tom Hughes, Vibol Hul, Vo Van Hung, Fatima Hussein, Ghislain Dzeret Indolo, Diah Iskandriati, Ariful Islam, Md. Tarikul Islam, Shariful Islam, Mohd Isnaim Ismail, Zuhair Bani Ismail, Jacques Iyanya, Joel Judson Jaimin, Amara Jambai, Jeffrine Rovie Ryan Japning, Alexter Japrin, Frantz Jean Louis, Titus Joe, Christine K. Johnson, Erica Johnson, Damien Joly, Jyotsna Joshi, Jusuf Kalengkongan, Douokoro Kalivogui, Nenneh Kamara-Chieyoe, Joseph Kamau, Eddy Kambale Syaluha, Ahmed Kandeil, Yagouba Kane, William Karesh, Kandeh Kargbo, Dibesh Karmacharya, Novie Kasenda, Ghazi Kayali, Ahmed S. Kayed, Rudovick Kazwala, Changwen Ke, Lucy Keates, Nigatu Kebede, Bouaphanh Khamphaphongphane, Chong Chee Kheong, Christopher Kilonzo, Ma-Sue Koffa, Amos G. Kollie, Marcel Sidiki Kondiano, Michel Koropo, Valere Kouamé Kouakou, Eugene Kouassi Koffi, Mariam Kourouma, Abdoulaye Ousmane Koutate, Citra Livi Kowel, Hermann Assemien Krou, Charles Kumakamba, Tina Kusumaningrum, Omnia Kutkat, François Lamah, Nguyen Thi Lan, Jennifer Lane, Christian Lange, Emmanuel Larmouth, Alice Latinne, Anne Laudisoit, Joseph Diffo Le Doux, Elizabeth Leasure, Katherine Leasure, Mat LeBreton, Jimmy Lee, Helen Lee, Mei Ho Lee, Amara Leno, Hongying Li, Eliza Liang, Neal Liang, Dorothy Lim, W. Ian Lipkin, Jun Liu, Modou Moustafa Lo, Leonoris Lojivis, Nguyen Van Long, Ashley Lucas, Jean Paul Lukusa, Victor Lungay, Shongo Lushima, Julius Lutwama, Wenjun Ma, Catherine Machalaba, Grace Maganga, Walter Simon Magesa, Sara H. Mahmoud, Maria Makuwa, Asha Makweta, Abdullah Al Mamun, Prajwol Manandhar, Patarapol Maneeorn, Harjeet Mann, Pe Bhele Maomy, Victorine Maptue, Stephanie Martinez, Alice Mathew, Yanne Vanessa Mavoungou, Min Thein Maw, Jonna Mazet, Placide Mbala, Emmanuel Mbuba, Eric Mbunwe, David McIver, Emma Mendelsohn, Valchy Bel-Bebi Miegakanda, Maureen Miller, Phan Quang Minh, Happy Mkali, Yassmin Moatasim, Jean Vivien Mombouli, Corina Monagin, Diego Montecino-Latorre, Arsene Mossoun Mossoun, Ahmed Mostafa, Moctar Mouiche, Romain Bagamboula Mpassi, Alphonce Msigwa, Antoine Mudakikwa, Laura Benedict Mugok, Prime Mulembakani, PREDICT Consortium.

One Health Outlook. 2021;3(1):11. DOI: 10.1186/s42522-021-00036-9

Autoantibody Profiling in Plasma of Dengue Virus-Infected Individuals.

Vo Hoa Thi My, Duong Veasna, Ly Sowath,Li, Quan-Zhen, Dussart Philippe, Cantaert Tineke.

Pathogens. 2020;9(12). DOI: 10.3390/pathogens9121060

Comparison of dengue case classification schemes and evaluation of biological changes in different dengue clinical patterns in a longitudinal follow-up of hospitalized children in Cambodia

Dussart Philippe*, Duong Veasna*, Bleakley Kevin, Fortas Camille, Lorn Try Patrich, Kim Kim Srorn, Choeung Rithy, In Saraden, Andries Anne-Claire, Cantaert Tineke, Flamand Marie, Buchy Philippe, Sakuntabhai Anavaj.

PLoS Negl Trop Dis. 2020;14(9):e0008603. DOI: 10.1371/journal.pntd.0008603

Comparison of Japanese Encephalitis Force of Infection in Pigs, Poultry and Dogs in Cambodian Villages

Ladreyt Héléna,Auerswald Heidi, Tum Sothyra, Ken Sreymom, Heng Leangyi, In Saraden, Lay Sokchea, Top Chakriyouth, Ly Sowath, Duong Veasna, Dussart Philippe, Durand Benoit, Chevalier Véronique.

Pathogens. Multidisciplinary Digital Publishing Institute; 2020;9(9):719. DOI: 10.3390/pathogens9090719

Coronavirus surveillance of wildlife in the Lao People’s Democratic Republic detects viral RNA in rodents

McIver David J., Silithammavong Soubanh,  Theppangna Watthana,  Gillis Amethyst,  Douangngeun Bounlom,  Khammavong Kongsy,  Singhalath Sinpakone,  Duong Veasna,  Buchy Philippe,  Olson Sarah H.,  Keatts Lucy,  Fine Amanda E.,  Greatorex Zoe,  Gilbert Martin,  LeBreton Matthew,  Saylors Karen,  Joly Damien O.,  Rubin Edward M.,  Lange Christian E. 

Arch Virol. 2020;165(8):1869‑75. DOI: 10.1007/s00705-020-04683-7

Decreased Type I Interferon Production by Plasmacytoid Dendritic Cells Contributes to Severe Dengue

Upasani Vinit, Scagnolari Carolina; Frasca Federica,  Smith Nikaïa,  Bondet Vincent,  Vanderlinden Axelle,  Lay Sokchea,  Auerswald Heidi,  Heng Sothy,  Laurent Denis,  Ly Sowath,  Duong Veasna,  Antonelli Guido,  Dussart Philippe,  Duffy Darragh,  Cantaert Tineke.

Front Immunol. 2020;11:605087. DOI: 10.3389/fimmu.2020.605087

Dengue viremia kinetics in asymptomatic and symptomatic infection

Matangkasombut Ponpan, Manopwisedjaroen Kajohnpong, Pitabut Nada, Thaloengsok Sasikanya, Suraamornkul Swangjit, Yingtaweesak Tawatchai, Duong Veasna, Sakuntabhai Anavaj, Paul Richard, Singhasivanon Pratap.

International Journal of Infectious Diseases. 2020;101:90‑7. DOI: 10.1016/j.ijid.2020.09.1446

Dynamics and diversity of mosquito vectors of Japanese encephalitis virus in Kandal province, Cambodia

Boyer Sebastien, Peng Borin, Pang Senglong, Chevalier Véronique, Duong Veasna, Gorman Christopher, Dussart Philippe, Fontenille Didier, Cappelle Julien.

Journal of Asia-Pacific Entomology. 2020;23(4):1048‑54. DOI: 10.1016/j.aspen.2020.08.018

Editorial: Nutritional Aspects of Immunity and Immunometabolism in Health and Disease

Karlsson Erik A., Beck Melinda A., MacIver Nancie J. 

Frontiers in Immunology, 10/07/2020 ; doi: 10.3389/fimmu.2020.595115

Enhanced Zika virus susceptibility of globally invasive Aedes aegypti populations

Aubry Fabien, Dabo Stéphanie, Manet Caroline, Filipović Igor, Rose Noah H., Miot Elliott F., Martynow Daria, Baidaliuk Artem, Merkling Sarah H., Dickson Laura B., Crist Anna B., Anyango Victor O., Romero-Vivas Claudia M., Vega-Rúa Anubis, Dusfour Isabelle, Jiolle Davy, Paupy Christophe, Mayanja Martin N., Lutwama Julius J., Kohl Alain, Duong Veasna, Ponlawat Alongkot, Sylla Massamba, Akorli Jewelna, Otoo Sampson, Lutomiah Joel, Sang Rosemary, Mutebi John-Paul, Cao-Lormeau Van-Mai, Jarman Richard G., Diagne Cheikh T., Faye Oumar, Faye Ousmane, Sall Amadou A., McBride Carolyn S., Montagutelli Xavier, Rašić Gordana, Lambrechts Louis.

Science. 2020;370(6519):991‑6. DOI: 10.1126/science.abd3663

Epidemiology and pathological progression of erythematous lip lesions in captive sun bears (Helarctos malayanus)

Officer Kirsty, Pruvot Mathieu, Horwood Paul, Denk Daniela, Warren Kris, Hul Vibol, Thy Nhim, Broadis Nev, Dussart Philippe, Jackson Bethany.

PLoS ONE. 2020;15(12):e0243180. DOI: 10.1371/journal.pone.0243180

Improved detection of dengue and Zika viruses using multiplex RT-qPCR assays

Ou Tey Putita, Yun Chanvannak, Auerswald Heidi, In Saraden, Leang Rithea, Huy Rekol, Choeung Rithy, Dussart Philippe, Duong Veasna.

Journal of Virological Methods. 2020;282:113862. DOI: 10.1016/j.jviromet.2020.113862

Nipah virus circulation at human–bat interfaces, Cambodia

Cappelle Julien, Hoem Thavry, Hul Vibol, Furey Neil, Nguon Kunthy, Prigent Steven, Dupon Liane, Ken Sreymom, Neung Chhoeuth, Hok Visal, Pring Long, Lim Thona, Bumrungsri Sara, Duboz Raphaël, Buchy Philippe, Ly Sowath, Duong Veasna, Tarantola Arnaud, Binot Aurélie, Dussart Philippe.

Bull World Health Organ. 2020;98(8):539‑47. DOI: 10.2471/BLT.20.254227

Novel genome sequences of cell-fusing agent virus allow comparison of virus phylogeny with the genetic structure of Aedes aegypti populations

Baidaliuk Artem, Lequime Sébastian, Moltini-Conclois Isabelle, Dabo Stéphanie, Dickson Laura B, Prot Matthieu, Duong Veasna, Dussart Philippe, Boyer Sébastien, Shi Chenyan, Matthijnssens Jelle, Guglielmini Julien, Gloria-Soria Andrea, Simon-Lorière Etienne, Lambrechts Louis.

Virus Evolution. 2020;6(1):veaa018. DOI: 10.1093/ve/veaa018

Patterns of foraging activity and fidelity in a southeast Asian flying fox

Schloesing Elodie, Chambon Rémi, Tran Annelise, Choden Kinley, Ravon Sébastien, Epstein Jonathan H., Hoem Thavry, Furey Neil, Labadie Morgane, Bourgarel Mathieu, De Nys Hélène M., Caron Alexandre, Cappelle Julien.

Mov Ecol. 2020;8(1):46. DOI: 10.1186/s40462-020-00232-8

Perception of health risks in Lao market vendors

Philavong Chanfong, Pruvot Mathieu, Reinharz Daniel, Mayxay Mayfong, Khammavong Kongsy, Milavong Phonesavanh, Rattanavong Sayapeth, Horwood Paul F., Dussart Philippe, Douangngeun Bounlom, Theppangna Watthana, Fine Amanda E., Robinson Matthew T., Newton Paul N.

Zoonoses and Public Health. Wiley-Blackwell; 2020; DOI: 10.1111/zph.12759

Quantifying within-host diversity of H5N1 influenza viruses in humans and poultry in Cambodia

Moncla Louise H., Bedford Trevor, Dussart Philippe, Horm Srey Viseth, Rith Sareth, Buchy Philippe, Karlsson Erik A., Li Lifeng, Liu Yongmei, Zhu Huachen, Guan Yi, Friedrich Thomas C., Horwood Paul F.

PLoS Pathog. 2020;16(1):e1008191. DOI: 10.1371/journal.ppat.1008191

Serological Evidence for Japanese Encephalitis and West Nile Virus Infections in Domestic Birds in Cambodia

Auerswald Heidi, Ruget Anne-Sophie, Ladreyt Helena, In Saraden, Mao Sokthearom, Sorn San, Tum Sothyra, Duong Veasna, Dussart Philippe, Cappelle Julien**, Chevalier Véronique**

Front Vet Sci. 2020;7:15. DOI: 10.3389/fvets.2020.00015

TLR2 on blood monocytes senses dengue virus infection and its expression correlates with disease pathogenesis

Aguilar-Briseño José A., Upasani Vinit, Ellen Bram M. ter, Moser Jill, Pauzuolis Mindaugas, Ruiz-Silva Mariana, Heng Sothy, Laurent Denis, Choeung Rithy, Dussart Philippe, Cantaert Tineke, Smit Jolanda M., Rodenhuis-Zybert Izabela A.

Nature Communications. Nature Publishing Group; 2020;11(1):1‑14. DOI: 10.1038/s41467-020-16849-7

Transmission experiments support clade-level differences in the transmission and pathogenicity of Cambodian influenza A/H5N1 viruses

Horwood Paul F., Fabrizio Thomas, Horm Srey Viseth, Metlin Artem, Ros Sopheaktra, Tok Songha, Jeevan Trushar, Seiler Patrick, Y Phalla, Rith Sareth, Suttie Annika, Buchy Philippe, Karlsson Erik A., Webby Richard, Dussart Philippe.

Emerging Microbes & Infections. Taylor & Francis; 2020;9(1):1702‑11. DOI: 10.1080/22221751.2020.1792353

Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization

Temmam Sarah, Hul Vibol, Bigot Thomas, Bessaud Maël, Chrétien Delphine, Hoem Thavry, Gorman Christopher, Duong Veasna, Dussart Philippe, Cappelle Julien, Eloit Marc.

Infection, Genetics and Evolution. 2020;78:104130. DOI: 10.1016/j.meegid.2019.104130

Zikavirus prME Envelope Pseudotyped Human Immunodeficiency Virus Type-1 as a Novel Tool for Glioblastoma-Directed Virotherapy

Kretschmer Maibritt, Kadlubowska Patrycja, Hoffmann Daniel, Schwalbe Birco, Auerswald Heidi, Schreiber Michael.

Cancers. 2020;12(4):1000. DOI: 10.3390/cancers12041000

Publications in journals without Impact Factor in 2020

Rapid metagenomic characterization of a case of imported COVID-19 in Cambodia

Manning Jessica E., Bohl Jennifer A., Lay Sreyngim, Chea Sophana, Sovann Ly, Sengdoeurn Yi, Heng Seng, Vuthy Chan, Kalantar Katrina, Ahyong Vida, Tan Michelle, Sheu Jonathan, Tato Cristina M., DeRisi Joseph L., Baril Laurence, Duong Veasna, Dussart Philippe, Karlsson Erik A.

bioRxiv. 2020; DOI: 10.1101/2020.03.02.968818

A 1-week intradermal dose-sparing regimen for rabies post-exposure prophylaxis (RESIST-2): an observational cohort study

Tineke Cantaert, Laurence Borand, Lauriane Kergoat, Chanthy Leng, Sivlin Ung, Sotheary In, Yiksing Peng, Chandara Phoeun, Chanthy Hing, Chun Navy Taing, Manil Saman, Sivuth Ong, Channa Mey, Rithy Choeung, Sowath Ly, Philippe Dussart, Hervé Bourhy, Arnaud Tarantola.

Lancet Infect Dis. 2019;19(12):1355‑62. DOI: 10.1016/S1473-3099(19)30311-1

A New High-Throughput Tool to Screen Mosquito-Borne Viruses in Zika Virus Endemic/Epidemic Areas

Sara Moutailler, Lena Yousfi, Laurence Mousson, Elodie Devillers, Marie Vazeille, Anubis Vega-Rúa, Yvon Perrin, Frédéric Jourdain, Fabrice Chandre, Arnaud Cannet, Sandrine Chantilly, Johana Restrepo, Amandine Guidez, Isabelle Dusfour, Filipe Vieira Santos de Abreu, Taissa Pereira dos Santos, Davy Jiolle, Tessa M. Visser, Constantianus J. M. Koenraadt, Merril Wongsokarijo, Mawlouth Diallo, Diawo Diallo, Alioune Gaye, Sébastien Boyer, Veasna Duong, Géraldine Piorkowski, Christophe Paupy, Ricardo Lourenco de Oliveira, Xavier de Lamballerie, Anna-Bella Failloux.

Viruses. Multidisciplinary Digital Publishing Institute; 2019;11(10):904. DOI: 10.3390/v11100904

An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia

Julia Ledien, Kimsan Souv, Rithea Leang, Rekol Huy, Anthony Cousien, Muslim Peas, Yves Froehlich, Raphaël Duboz, Sivuth Ong, Veasna Duong, Philippe Buchy, Philippe Dussart, Arnaud Tarantola.

PLOS ONE. Public Library of Science; 2019;14(2):e0212003. DOI: 10.1371/journal.pone.0212003

Asymptomatic Dengue Virus Infections, Cambodia, 2012–2013

Sowath Ly, Camille Fortas, Veasna Duong, Tarik Benmarhnia, Anavaj Sakuntabhai, Richard Paul, Rekol Huy, Sopheak Sorn, Kunthy Nguon, Siam Chan, Souv Kimsan, Sivuth Ong, Kim Srorn Kim, Sowathy Buoy, Lim Voeung, Philippe Dussart, Philippe Buchy, Arnaud Tarantola.

Emerging Infectious Diseases, 07/2019 ; DOI:10.3201/eid2507.181794

Avian influenza in the Greater Mekong Subregion, 2003-2018

Annika Suttie, Erik A. Karlsson, Yi-Mo Deng, Aeron C. Hurt, Andrew R. Greenhill, Ian G. Barr, Philippe Dussart, Paul F. Horwood.

Infection, Genetics and Evolution. 2019;74:103920. DOI: 10.1016/j.meegid.2019.103920

Avian influenza virus detection, temporality and co-infection in poultry in Cambodian border provinces, 2017–2018

Erik A. Karlsson, Srey Viseth Horm, Songha Tok, Sothyra Tum, Wantanee Kalpravidh, Filip Claes, Kristina Osbjer, Philippe Dussart.

Emerging Microbes & Infections. 2019;8(1):637‑9. DOI: 10.1080/22221751.2019.1604085

Changing landscapes of Southeast Asia and rodent-borne diseases: decreased diversity but increased transmission risks

Serge Morand, Kim Blasdell, Frédéric Bordes, Philippe Buchy, Bernard Carcy, Kittipong Chaisiri, Yannick Chaval, Julien Claude, Jean-François Cosson, Marc Desquesnes, Sathaporn Jittapalapong, Tawisa Jiyipong, Anamika Karnchanabanthoen, Pumhom Pornpan, Jean-Marc Rolain, Annelise Tran. Ecol Appl. 2019;29(4):e01886. DOI: 10.1002/eap.1886

Circulation and characterization of seasonal influenza viruses in Cambodia, 2012-2015

Paul F. Horwood, Erik A. Karlsson, Srey Viseth Horm, Sovann Ly, Seng Heng, Savuth Chin, Chau Darapheak, David Saunders, Lon Chanthap, Sareth Rith, Phalla Y, Kim Lay Chea, Borann Sar, Amy Parry, Vanra Ieng, Reiko Tsuyouka, Yi-Mo Deng, Aeron C. Hurt, Ian G. Barr, Naomi Komadina, Philippe Buchy, Philippe Dussart.

Influenza and Other Respiratory Viruses. 2019;13(5):465‑76. DOI: 10.1111/irv.12647

Dengue modeling in rural Cambodia: Statistical performance versus epidemiological relevance

Clara Champagne, Richard Paul, Sowath Ly, Veasna Duong, Rithea Leang, Bernard Cazelles.

Epidemics. 2019;26:43‑57. DOI: 10.1016/j.epidem.2018.08.004

Diversity of A(H5N1) clade 2.3.2.1c avian influenza viruses with evidence of reassortment in Cambodia, 2014-2016

Annika Suttie, Songha Tok, Sokhoun Yann, Ponnarath Keo, Srey Viseth Horm, Merryn Roe, Matthew Kaye, San Sorn, Davun Holl, Sothyra Tum, Philippe Buchy, Ian Barr, Aeron Hurt, Andrew R. Greenhill, Erik A. Karlsson, Dhanasekaran Vijaykrishna, Yi-Mo Deng, Philippe Dussart**, Paul F. Horwood**.

PLoS ONE. 2019;14(12):e0226108. DOI: 10.1371/journal.pone.0226108

Emergence of Influenza A(H7N4) Virus, Cambodia

Dhanasekaran Vijaykrishna, Yi-Mo Deng, Miguel L. Grau, Matthew Kay, Annika Suttie, Paul F. Horwood, Wantanee Kalpravidh, Filip Claes, Kristina Osbjer, Phillipe Dussart, Ian G. Barr, Erik A. Karlsson.

Emerg Infect Dis. 2019;25(10):1988‑91. DOI: 10.3201/eid2510.190506

Establishment of Asia-Pacific Network for Enterovirus Surveillance

Mu-Lin Chiu, Shu-Ting Luo, Ya-Yen Chen, Wan Yu Chung, Veasna Duong, Philippe Dussart, Yoke-Fun Chan, David Perera, Mong How Ooi, Nguyen Thi Thanh Thao, Huu Khanh Truong, Min-Shi Lee.

Vaccine. 2020;38(1):1‑9. DOI: 10.1016/j.vaccine.2019.09.111

Evidence of exposure and human seroconversion during an outbreak of avian influenza A(H5N1) among poultry in Cameroon

Chavely Gwladys Monamele, Phalla Y., Erik Albert Karlsson, Marie-Astrid Vernet, Abel Wade, Marie-Claire Assoumou Okomo, Aristide Stéphane Abah Abah, Sokhoun Yann, Georges Alain Mballa Etoundi, Njankouo Ripa Mohamadou, Jean-Marc Feussom, Sreyviseth Horm, Paul Francis Horwood, Sowath Ly, Richard Njouom, Philippe Dussart.

Emerging Microbes & Infections. 2019;8(1):186‑96. DOI: 10.1080/22221751.2018.1564631

Extreme temperature event and mass mortality of insectivorous bats

Mathieu Pruvot, Julien Cappelle, Neil Furey, Vibol Hul, Huy Sreang Heng, Veasna Duong, Philippe Dussart, Paul Horwood.

Eur J Wildl Res. 2019;65(3):41. DOI: 10.1007/s10344-019-1280-8

First dengue virus seroprevalence study on Madeira Island after the 2012 outbreak indicates unreported dengue circulation

Heidi Auerswald*, Ana de Jesus*, Gonçalo Seixas, Teresa Nazareth, Saraden In, Sokthearom Mao, Veasna Duong, Ana Clara Silva, Richard Paul, Philippe Dussart**, Carla Alexandra Sousa**.

Parasites & Vectors. 2019;12(1):103. DOI: 10.1186/s13071-019-3357-3

High Activation of γδ T Cells and the γδ2pos T-Cell Subset Is Associated With the Onset of Tuberculosis-Associated Immune Reconstitution Inflammatory Syndrome, ANRS 12153 CAPRI NK

Polidy Pean, Janin Nouhin, Meng Ratana, Yoann Madec, Laurence Borand, Olivier Marcy, Didier Laureillard, Marcelo Fernandez, Françoise Barré-Sinoussi, Laurence Weiss, Daniel Scott-Algara.

Front Immunol. 2019;10:2018. DOI: 10.3389/fimmu.2019.02018

How Central Is the Domestic Pig in the Epidemiological Cycle of Japanese Encephalitis Virus? A Review of Scientific Evidence and Implications for Disease Control

Héléna Ladreyt, Benoit Durand, Philippe Dussart, Véronique Chevalier

Viruses. Multidisciplinary Digital Publishing Institute; 2019;11(10):949. DOI: 10.3390/v11100949

Impaired Antibody-Independent Immune Response of B Cells in Patients With Acute Dengue Infection

Vinit Upasani, Hoa Thi My Vo, Sivlin Ung, Sothy Heng, Denis Laurent, Rithy Choeung, Veasna Duong, Sopheak Sorn, Sowath Ly, Izabela A. Rodenhuis-Zybert, Philippe Dussart, Tineke Cantaert.

Front Immunol. 2019;10:2500. DOI: 10.3389/fimmu.2019.02500

Insights into the Host Range, Genetic Diversity, and Geographical Distribution of Jingmenviruses

Sarah Temmam, Thomas Bigot, Delphine Chrétien, Mathilde Gondard, Philippe Pérot, Virginie Pommelet, Evelyne Dufour, Stéphane Petres, Elodie Devillers, Thavry Hoem, Valérie Pinarello, Vibol Hul, Khamsing Vongphayloth, Jeffrey C. Hertz, Irène Loiseau, Marine Dumarest, Veasna Duong, Muriel Vayssier-Taussat, Marc Grandadam, Emmanuel Albina, Philippe Dussart, Sara Moutailler, Julien Cappelle, Paul T. Brey, Marc Eloit.

mSphere. American Society for Microbiology 4(6):e00645-19. DOI: 10.1128/mSphere.00645-19

Intradermal rabies post-exposure prophylaxis can be abridged with no measurable impact on clinical outcome in Cambodia, 2003-2014

Arnaud Tarantola, Sowath Ly, Malen Chan, Sotheary In, Yiksing Peng, Chanthy Hing, Chun Navy Taing, Chandara Phoen, Sovann Ly, Simon Cauchemez, Philippe Buchy, Philippe Dussart, Hervé Bourhy, Jean-Yves Mary.

Vaccine. 2019;37 Suppl 1:A118‑27. DOI: 10.1016/j.vaccine.2018.10.054

Inventory of molecular markers affecting biological characteristics of avian influenza A viruses

Annika Suttie, Yi-Mo Deng, Andrew R. Greenhill, Philippe Dussart, Paul F. Horwood, Erik A. Karlsson.

Virus Genes. 2019;55(6):739‑68. DOI: 10.1007/s11262-019-01700-z

Molecular epidemiology of hepatitis C virus in Cambodia during 2016–2017

Janin Nouhin, Momoko Iwamoto, Sophearot Prak, Jean-Philippe Dousset, Kerya Phon, Seiha Heng, Alexandra Kerleguer, Mickaël Le Paih, Philippe Dussart, David Maman, François Rouet.

Sci Rep. Nature Publishing Group; 2019;9(1):7314. DOI: 10.1038/s41598-019-43785-4

Predicting Dengue Outbreaks in Cambodia

Anthony Cousien, Julia Ledien, Kimsan Souv, Rithea Leang, Rekol Huy, Didier Fontenille, Sowath Ly, Veasna Duong, Philippe Dussart, Patrice Piola**, Simon Cauchemez**, Arnaud Tarantola**.

Emerging Infectious Diseases, 12/2019 ; DOI:10.3201/eid2512.181193

Pteropus lylei primarily forages in residential areas in Kandal, Cambodia

Kinley Choden*, Sébastien Ravon*, Jonathan H. Epstein, Thavry Hoem, Neil Furey, Marie Gely, Audrey Jolivot, Vibol Hul, Chhoeuth Neung, Annelise Tran, Julien Cappelle.

Ecology and Evolution. 2019;9(7):4181‑91. DOI: 10.1002/ece3.5046

The Dengue ED3 Dot Assay, a Novel Serological Test for the Detection of Denguevirus Type-Specific Antibodies and Its Application in a Retrospective Seroprevalence Study

Heidi Auerswald, Leonard Klepsch, Sebastian Schreiber, Janne Hülsemann, Kati Franzke, Simone Kann, Bunthin Y, Veasna Duong, Philippe Buchy, Michael Schreiber.

Viruses. 2019;11(4):304. DOI: 10.3390/v11040304

The evolution and genetic diversity of avian influenza A(H9N2) viruses in Cambodia, 2015 – 2016

Annika Suttie, Songha Tok, Sokhoun Yann, Ponnarath Keo, Srey Viseth Horm, Merryn Roe, Matthew Kaye, San Sorn, Davun Holl, Sothyra Tum, Ian G. Barr, Aeron C. Hurt, Andrew R. Greenhill, Erik A. Karlsson, Dhanasekaran Vijaykrishna, Yi-Mo Deng, Philippe Dussart**, Paul F. Horwood**.

PLoS ONE. 2019;14(12):e0225428. DOI: 10.1371/journal.pone.0225428

Toward a quantification of risks at the nexus of conservation and health: The case of bushmeat markets in Lao PDR

Mathieu Pruvot, Kongsy Khammavong, Phonesavanh Milavong, Chanfong Philavong, Daniel Reinharz, Mayfong Mayxay, Sayapeth Rattanavong, Paul Horwood, Philippe Dussart, Bounlom Douangngeun, Watthana Theppangna, Amanda E. Fine, Sarah H. Olson, Matthew Robinson, Paul Newton.

Science of The Total Environment. 2019;676:732‑45. DOI: 10.1016/j.scitotenv.2019.04.266

Publications in journals without Impact Factor in 2019

A Novel Polycipiviridae Virus Identified in Pteropus lylei Stools

Sarah Temmam, Vibol Hul, Thomas Bigot, Thavry Hoem, Christopher Gorman, Veasna Duong, Philippe Dussart, Julien Cappelle, Marc Eloit.

Microbiol Resour Announc. 2019;8(15):e01662-18. DOI: 10.1128/MRA.01662-18

A Blood RNA Signature Detecting Severe Disease in Young Dengue Patients at Hospital Arrival

Iryna Nikolayeva, Pierre Bost, Isabelle Casademont, Veasna Duong, Fanny Koeth, Matthieu Prot, Urszula Czerwinska, Sowath Ly, Kevin Bleakley, Tineke Cantaert, Philippe Dussart, Philippe Buchy, Etienne Simon-Lorière, Anavaj Sakuntabhai, Benno Schwikowski.

The Journal of Infectious Diseases. 2018;217(11):1690‑8. DOI: 10.1093/infdis/jiy086

Analytical and field evaluation of the Biocentric Generic HCV assay on open polyvalent PCR platforms in France and Cambodia

Nouhin, K. Bollore, J. Castera-Guy, S. Prak, S. Heng, A. Kerleguer, P. A. Rubbo, F. Rouet, E. Tuaillon.

Journal of Clinical Virology. 2018;108:53‑8. DOI: 10.1016/j.jcv.2018.09.011

Broad and long-lasting immune protection against various Chikungunya genotypes demonstrated by participants in a cross-sectional study in a Cambodian rural community

Heidi Auerswald, Camille Boussioux, Saraden In, Sokthearom Mao, Sivuth Ong, Rekol Huy, Rithea Leang, Malen Chan, Veasna Duong, Sowath Ly, Arnaud Tarantola, Philippe Dussart.

Emerging Microbes & Infections. Taylor & Francis; 2018;7(1):1‑13. DOI: 10.1038/s41426-017-0010-0

Co-circulation of Influenza A H5, H7, and H9 Viruses and Co-infected Poultry in Live Bird Markets, Cambodia

Paul F. Horwood, Srey Viseth Horm, Annika Suttie, Sopheak Thet, Phalla Y, Sareth Rith, San Sorn, Davun Holl, Sothyra Tum, Sowath Ly, Erik A. Karlsson, Arnaud Tarantola, Philippe Dussart.

Emerg Infect Dis. 2018;24(2):352‑5. DOI: 10.3201/eid2402.171360

Comparison of the dynamics of Japanese encephalitis virus circulation in sentinel pigs between a rural and a peri-urban setting in Cambodia

Juliette Di Francesco, Rithy Choeung, Borin Peng, Long Pring, Senglong Pang, Raphaël Duboz, Sivuth Ong, San Sorn, Arnaud Tarantola, Didier Fontenille, Veasna Duong, Philippe Dussart, Véronique Chevalier, Julien Cappelle.

PLOS Neglected Tropical Diseases. Public Library of Science; 2018;12(8):e0006644. DOI: 10.1371/journal.pntd.0006644

Contributions from the silent majority dominate dengue virus transmission

Quirine A. ten Bosch, Hannah E. Clapham, Louis Lambrechts, Veasna Duong, Philippe Buchy, Benjamin M. Althouse, Alun L. Lloyd, Lance A. Waller, Amy C. Morrison, Uriel Kitron, Gonzalo M. Vazquez-Prokopec, Thomas W. Scott, T. Alex Perkins.

PLoS Pathogens. Public Library of Science; 2018;14(5):e1006965. DOI: 10.1371/journal.ppat.1006965

Declining hepatitis E virus antibody prevalence in Phnom Penh, Cambodia during 1996-2017

Nouhin, Y. Madec, S. Prak, M. Ork, A. Kerleguer, Y. Froehlich, N. Pavio, F. Rouet.

Epidemiol Infect. 2018;147:e26. DOI: 10.1017/S0950268818002790

Dengue modeling in rural Cambodia: Statistical performance versus epidemiological relevance

Clara Champagne, Richard Paul, Sowath Ly, Veasna Duong, Rithea Leang, Bernard Cazelles.

Epidemics. 2019;26:43‑57. DOI: 10.1016/j.epidem.2018.08.004

Detection of Japanese Encephalitis Virus RNA in Human Throat Samples in Laos – A Pilot study

Tehmina Bharucha, Onanong Sengvilaipaseuth, Malee Seephonelee, Malavanh Vongsouvath, Manivanh Vongsouvath, Sayaphet Rattanavong, Géraldine Piorkowski, Marc Lecuit, Christopher Gorman, Jean-David Pommier, Paul N. Newton, Xavier de Lamballerie, Audrey Dubot-Pérès.

Sci Rep. 2018;8(1):8018. DOI: 10.1038/s41598-018-26333-4

Detection of Low Pathogenicity Influenza A(H7N3) Virus during Duck Mortality Event, Cambodia, 2017

Annika Suttie, Sokhoun Yann, Phalla Y, Sothyra Tum, Yi-Mo Deng, Vibol Hul, Viseth Srey Horm, Ian Barr, Andrew Greenhill, Paul F. Horwood, Kristina Osbjer, Erik A. Karlsson, Philippe Dussart.

Emerg Infect Dis. 2018;24(6):1103‑7. DOI: 10.3201/eid2406.172099

Development and validation of four one-step real-time RT-LAMP assays for specific detection of each dengue virus serotype

Benjamin Lopez-Jimena, Michaël Bekaert, Mohammed Bakheit, Sieghard Frischmann, Pranav Patel, Etienne Simon-Loriere, Louis Lambrechts, Veasna Duong, Philippe Dussart, Graham Harold, Cheikh Fall, Oumar Faye, Amadou Alpha Sall, Manfred Weidmann.

PLOS Neglected Tropical Diseases. Public Library of Science; 2018;12(5):e0006381. DOI: 10.1371/journal.pntd.0006381

Distribution of bat-borne viruses and environment patterns

Aneta Afelt, Audrey Lacroix, Urszula Zawadzka-Pawlewska, Wojciech Pokojski, Philippe Buchy, Roger Frutos.

Infection, Genetics and Evolution. 2018;58:181‑91. DOI: 10.1016/j.meegid.2017.12.009

Diverse laboratory colonies of Aedes aegypti harbor the same adult midgut bacterial microbiome

Laura B. Dickson, Amine Ghozlane, Stevenn Volant, Christiane Bouchier, Laurence Ma, Anubis Vega-Rúa, Isabelle Dusfour, Davy Jiolle, Christophe Paupy, Martin N. Mayanja, Alain Kohl, Julius J. Lutwama, Veasna Duong, Louis Lambrechts.

Parasites & Vectors. 2018;11(1):207. DOI: 10.1186/s13071-018-2780-1

Effects of mammarenavirus infection (Wēnzhōu virus) on the morphology of Rattus exulans

Jean Artois, Kim Blasdell, Veasna Duong, Philippe Buchy, Vibol Hul, Serge Morand, Julien Claude.

Infection, Genetics and Evolution. 2018;63:404‑9. DOI: 10.1016/j.meegid.2017.05.023

How much does direct transmission between pigs contribute to Japanese Encephalitis virus circulation? A modelling approach in Cambodia

Alpha Oumar II Diallo, Véronique Chevalier, Julien Cappelle, Veasna Duong, Didier Fontenille, Raphaël Duboz.

PLOS ONE. Public Library of Science; 2018;13(8):e0201209. DOI: 10.1371/journal.pone.0201209

Influenza A(H5N1) viruses with A(H9N2) single gene (matrix or PB1) reassortment isolated from Cambodian live bird markets

Annika Suttie, Erik A. Karlsson, Yi-Mo Deng, Srey Viseth Horm, Sokhoun Yann, Songha Tok, San Sorn, Davun Holl, Sothyra Tum, Aeron C. Hurt, Andrew R. Greenhill, Ian G. Barr, Paul F. Horwood, Philippe Dussart.

Virology. 2018;523:22‑6. DOI: 10.1016/j.virol.2018.07.028

Massive Iatrogenic Outbreak of Human Immunodeficiency Virus Type 1 in Rural Cambodia, 2014-2015

François Rouet, Janin Nouhin, Du-Ping Zheng, Benjamin Roche, Allison Black, Sophearot Prak, Marie Leoz, Catherine Gaudy-Graffin, Laurent Ferradini, Chandara Mom, Sovatha Mam, Charlotte Gautier, Gérard Lesage, Sreymom Ken, Kerya Phon, Alexandra Kerleguer, Chunfu Yang, William Killam, Masami Fujita, Chhivun Mean, Didier Fontenille, Francis Barin, Jean-Christophe Plantier, Trevor Bedford, Artur Ramos, Vonthanak Saphonn.

Clinical Infectious Diseases. 2018;66(11):1733‑41. DOI: 10.1093/cid/cix1071

Measuring Influenza Virus Infection Using Bioluminescent Reporter Viruses for In Vivo Imaging and In Vitro Replication Assays

Erik A. Karlsson, Victoria A. Meliopoulos, Vy Tran, Chandra Savage, Brandi Livingston, Stacey Schultz-Cherry, Andrew Mehle. Dans: Yamauchi Y, directeur.

Influenza Virus: Methods and Protocols. New York, NY: Springer; 2018. (Methods in Molecular Biology). DOI: 10.1007/978-1-4939-8678-1_21

Rabies Postexposure Prophylaxis Noncompletion After Dog Bites: Estimating the Unseen to Meet the Needs of the Underserved

Arnaud Tarantola, Sophie Blanchi, Julien Cappelle, Sowath Ly, Malen Chan, Sotheary In, Yiksing Peng, Chanthy Hing, Chun Navy Taing, Sovann Ly, Hervé Bourhy, Philippe Buchy, Philippe Dussart, Jean-Yves Mary.

American Journal of Epidemiology. 2018;187(2):306‑15. DOI: 10.1093/aje/kwx234

Taking a bite out of nutrition and arbovirus infection

James Weger-Lucarelli, Heidi Auerswald, Marco Vignuzzi, Phillipe Dussart, Erik A. Karlsson.

PLoS Negl Trop Dis. 2018;12(3):e0006247. DOI: 10.1371/journal.pntd.0006247

Usefulness of a serial algorithm of HBsAg and HBeAg rapid diagnosis tests to detect pregnant women at risk of HBV mother-to-child transmission in Cambodia, the ANRS 12328 pilot study

Olivier Ségéral, Dieynaba S. N’Diaye, Sophearot Prak, Janin Nouhin, Samsorphea Chhun, Wootichai Khamduang, Kenrena Chim, Anne-Marie Roque-Afonso, Patrice Piola, Laurence Borand, Nicole Ngo-Giang-Huong, François Rouet, ANRS 12328 12345 Study Group.

J Clin Virol. 2018;109:29‑34. DOI: 10.1016/j.jcv.2018.10.007

Wild birds in Chile Harbor diverse avian influenza A viruses

Pedro Jiménez-Bluhm, Erik A. Karlsson, Pamela Freiden, Bridgett Sharp, Francisca Di Pillo, Jorge E. Osorio, Christopher Hamilton-West, Stacey Schultz-Cherry.

Emerging Microbes & Infections. Taylor & Francis; 2018;7(1):1‑4. DOI: 10.1038/s41426-018-0046-9

A prospective, comparative study of severe neurological and uncomplicated hand, foot and mouth forms of paediatric enterovirus 71 infections

Yoann Crabol, Polidy Pean, Channa Mey, Veasna Duong, Beat Richner, Denis Laurent, Ky Santy, Heng Sothy, Philippe Dussart, Arnaud Tarantola, Philippe Buchy**, Paul F. Horwood**.

Int J Infect Dis. 2017;59:69‑76. DOI: 10.1016/j.ijid.2017.04.005

Aetiology of acute meningoencephalitis in Cambodian children, 2010–2013

Paul F Horwood*, Veasna Duong*, Denis Laurent, Channa Mey*, Heng Sothy, Ky Santy, Beat Richner, Seiha Heng, Sopheak Hem, Justine Cheval, Christopher Gorman, Philippe Dussart, Menno D de Jong, Alexandra Kerleguer, Bertrand Guillard, Bernadette Murgue, Marc Lecuit, Xavier de Lamballerie, Jeremy J Farrar, Arnaud Tarantola, Marc Eloit, Philippe Buchy.

Emerg Microbes Infect. 2017;6(5):e35. DOI: 10.1038/emi.2017.15

Assessment of rodent communities in two provinces of Cambodia

Caroline Fillieux, Chea Sokha, Jill-Léa Ramassamy, Vibol Hul, Sarah Olson, Amanda Fine, Philippe Dussart, Waraphon Phimpraphai, Paul Horwood, Mathieu Pruvot.

Cambodian Journal of Natural History. 2017;2017:147‑52

Chikungunya virus emergence in the Lao PDR, 2012-2013

Somphavanh Somlor, Khamsing Vongpayloth, Laure Diancourt, Philippe Buchy, Veasna Duong, Darouny Phonekeo, Pakapak Ketmayoon, Phengta Vongphrachanh, Paul T. Brey, Valérie Caro, Yves Buisson, Marc Grandadam.

PLoS One. 2017;12(12):e0189879. DOI: 10.1371/journal.pone.0189879

Diversity of bat astroviruses in Lao PDR and Cambodia

Audrey Lacroix, Veasna Duong, Vibol Hul, Sorn San, Holl Davun, Keo Omaliss, Sokha Chea, Alexandre Hassanin, Watthana Theppangna, Soubanh Silithammavong, Kongsy Khammavong, Sinpakone Singhalath, Aneta Afelt, Zoe Greatorex, Amanda E. Fine, Tracey Goldstein, Sarah Olson, Damien O. Joly, Lucy Keatts, Philippe Dussart, Roger Frutos, Philippe Buchy.

Infection, Genetics and Evolution. 2017;47:41‑50. DOI: 10.1016/j.meegid.2016.11.013

Effects of mammarenavirus infection (Wēnzhōu virus) on the morphology of Rattus exulans

Jean Artois, Kim Blasdell, Veasna Duong, Philippe Buchy, Vibol Hul, Serge Morand, Julien Claude.

Infection, Genetics and Evolution. 2018;63:404‑9. DOI: 10.1016/j.meegid.2017.05.02

Establishing seasonal and alert influenza thresholds in Cambodia using the WHO method: implications for effective utilization of influenza surveillance in the tropics and subtropics

Sovann Ly, Takeshi Arashiro, Vanra Ieng, Reiko Tsuyuoka, Amy Parry, Paul Horwood, Seng Heng, Sarah Hamid, Katelijn Vandemaele, Savuth Chin, Borann Sar, Yuzo Arima.

Western Pac Surveill Response J. 2017;8(1):22‑32. DOI: 10.5365/WPSAR.2017.8.1.002

Genetic diversity of coronaviruses in bats in Lao PDR and Cambodia

Audrey Lacroix, Veasna Duong, Vibol Hul, Sorn San, Hull Davun, Keo Omaliss, Sokha Chea, Alexandre Hassanin, Watthana Theppangna, Soubanh Silithammavong, Kongsy Khammavong, Sinpakone Singhalath, Zoe Greatorex, Amanda E. Fine, Tracey Goldstein, Sarah Olson, Damien O. Joly, Lucy Keatts, Philippe Dussart, Aneta Afelt, Roger Frutos, Philippe Buchy.

Infect Genet Evol. 2017;48:10‑8. DOI: 10.1016/j.meegid.2016.11.029

Increased adaptive immune responses and proper feedback regulation protect against clinical dengue

Etienne Simon-Lorière, Veasna Duong, Ahmed Tawfik, Sivlin Ung, Sowath Ly, Isabelle Casadémont, Matthieu Prot, Noémie Courtejoie, Kevin Bleakley, Philippe Buchy, Arnaud Tarantola, Philippe Dussart, Tineke Cantaert, Anavaj Sakuntabhai.

Sci Transl Med. 2017;9(405). DOI: 10.1126/scitranslmed.aal5088

Interleukin-1 receptor antagonist, a biomarker of response to anti-TB treatment in HIV/TB co-infected patients

Janin Nouhin, Polidy Pean, Yoann Madec, Mathieu F. Chevalier, Celine Didier, Laurence Borand, François-Xavier Blanc, Daniel Scott-Algara, Didier Laureillard, Laurence Weiss.

J Infect. 2017;74(5):456‑65. DOI: 10.1016/j.jinf.2017.01.016

Isolation and full-genome sequences of Japanese encephalitis virus genotype I strains from Cambodian human patients, mosquitoes and pigs

Veasna Duong, Rithy Choeung, Christopher Gorman, Denis Laurent, Yoann Crabol, Channa Mey, Borin Peng, Juliette Di Francesco, Vibol Hul, Heng Sothy, Ky Santy, Beat Richner, Jean-David Pommier, San Sorn, Véronique Chevalier, Philippe Buchy, Xavier de Lamballerie, Julien Cappelle, Paul Francis Horwood, Philippe Dussart.

J Gen Virol. 2017;98(9):2287‑96. DOI: 10.1099/jgv.0.000892

Low Circulation of Zika Virus, Cambodia, 2007-2016

Veasna Duong, Sivuth Ong, Rithea Leang, Rekol Huy, Sowath Ly, Ugo Mounier, Teyputita Ou, Saraden In, Borin Peng, Sreymom Ken, Philippe Buchy, Arnaud Tarantola, Paul F. Horwood, Philippe Dussart.

Emerg Infect Dis. 2017;23(2):296‑9. DOI: 10.3201/eid2302.161432

Massive Iatrogenic Outbreak of Human Immunodeficiency Virus Type 1 in Rural Cambodia, 2014–2015

François Rouet, Janin Nouhin, Du-Ping Zheng, Benjamin Roche, Allison Black, Sophearot Prak, Marie Leoz, Catherine Gaudy-Graffin, Laurent Ferradini, Chandara Mom, Sovatha Mam, Charlotte Gautier, Gérard Lesage, Sreymom Ken, Kerya Phon, Alexandra Kerleguer, Chunfu Yang, William Killam, Masami Fujita, Chhivun Mean, Didier Fontenille, Francis Barin, Jean-Christophe Plantier, Trevor Bedford, Artur Ramos, Vonthanak Saphonn.

Clinical Infectious Diseases. 2018;66(11):1733‑41. DOI: 10.1093/cid/cix1071

Proteinuria during dengue fever in children

Anne-Claire Andries, Veasna Duong, Julien Cappelle, Sivuth Ong, Alexandra Kerleguer, Sowath Ly, Arnaud Tarantola, Paul F. Horwood, Anavaj Sakuntabhai, Philippe Dussart, Philippe Buchy.

Int J Infect Dis. 2017;55:38‑44. DOI: 10.1016/j.ijid.2016.12.022

Seroprevalence and Transmission of Human Influenza A(H5N1) Virus before and after Virus Reassortment, Cambodia, 2006–2014

Sowath Ly, Paul Horwood, Malen Chan, Sareth Rith, Sopheak Sorn, Kunthea Oeung, Kunthy Nguon, Siam Chan, Phalla Y, Amy Parry, Reiko Tsuyuoka, Sovann Ly, Beat Richner, Denis Laurent, Sirenda Vong, Philippe Dussart, Philippe Buchy, Arnaud Tarantola.

Emerg Infect Dis. 2017;23(2):300‑3. DOI: 10.3201/eid2302.161232

Zika virus in Asia

Veasna Duong, Philippe Dussart, Philippe Buchy.

International Journal of Infectious Diseases. Elsevier; 2017;54:121‑8. DOI: 10.1016/j.ijid.2016.11.420

Publications in journals without Impact Factor in 2017

Diverse laboratory colonies of Aedes aegypti harbor the same adult midgut bacterial microbiome

Laura B. Dickson, Amine Ghozlane, Stevenn Volant, Christiane Bouchier, Laurence Ma, Anubis Vega-Rúa, Isabelle Dusfour, Davy Jiolle, Christophe Paupy, Martin N. Mayanja, Alain Kohl, Julius J. Lutwama, Veasna Duong, Louis Lambrechts.

bioRxiv, 10/10/2017 ; doi:10.1101/200659

A confirmed rabies case in a French resident in Cambodia, June 2015

Arnaud Tarantola, Channa Mey, Sowath Ly, Cornelia Haener, Nareth Chhor, Uong Meng, Sovann Ly, Didier Fontenille, Philippe Dussart.

Journal of Travel Medicine. 2016;23(2):tav012. DOI: 10.1093/jtm/tav012

An optimised age-based dosing regimen for single low-dose primaquine for blocking malaria transmission in Cambodia

Rithea Leang, Naw Htee Khu, Mavuto Mukaka, Mark Debackere, Rupam Tripura, Soy Ty Kheang, Say Chy, Neeraj Kak, Philippe Buchy, Arnaud Tarantola, Didier Menard, Arantxa Roca-Felterer, Rick M. Fairhurst, Sim Kheng, Sinoun Muth, Song Ngak, Arjen M. Dondorp, Nicholas J. White, Walter Robert John Taylor.

BMC Med. 2016;14(1):171. DOI: 10.1186/s12916-016-0701-8

Caring for patients with rabies in developing countries – the neglected importance of palliative care

Arnaud Tarantola, Yoann Crabol, Bangalore Jayakrishnappa Mahendra, Sotheary In, Hubert Barennes, Hervé Bourhy, Yiksing Peng, Sowath Ly, Philippe Buchy.

Tropical Medicine & International Health. 2016;21(4):564‑7. DOI: 10.1111/tmi.12670

Dual Combined Real-Time Reverse Transcription Polymerase Chain Reaction Assay for the Diagnosis of Lyssavirus Infection

Laurent Dacheux, Florence Larrous, Rachel Lavenir, Anthony Lepelletier, Abdellah Faouzi, Cécile Troupin, Jalal Nourlil, Philippe Buchy, Herve Bourhy.

PLOS Neglected Tropical Diseases. Public Library of Science; 2016;10(7):e0004812. DOI: 10.1371/journal.pntd.0004812

Early diagnosis of dengue disease severity in a resource-limited Asian country

Philippe Cavailler, Arnaud Tarantola, Yee Sin Leo, Andrew A. Lover, Anne Rachline, Moniboth Duch, Rekol Huy, Ai Li Quake, Yuvatha Kdan, Veasna Duong, Jeremy L. Brett, Philippe Buchy.

BMC Infectious Diseases. 2016;16(1):512. DOI: 10.1186/s12879-016-1849-8

Environmental contamination and risk factors for transmission of highly pathogenic avian influenza A(H5N1) to humans, Cambodia, 2006-2010

Sowath Ly, Sirenda Vong, Philippe Cavailler, Elizabeth Mumford, Channa Mey, Sareth Rith, Maria D. Van Kerkhove, San Sorn, Touch Sok, Arnaud Tarantola**, Philippe Buchy**.

BMC Infect Dis. 2016;16(1):631. DOI: 10.1186/s12879-016-1950-z

Estimating the Burden of Leptospirosis among Febrile Subjects Aged below 20 Years in Kampong Cham Communities, Cambodia, 2007-2009

Sopheak Hem, Sowath Ly, Irene Votsi, Florian Vogt, Nima Asgari, Philippe Buchy, Seiha Heng, Mathieu Picardeau, Touch Sok, Sovann Ly, Rekol Huy, Bertrand Guillard, Simon Cauchemez, Arnaud Tarantola.

PLOS ONE. Public Library of Science; 2016;11(4):e0151555. DOI: 10.1371/journal.pone.0151555

Evaluation of the performances of six commercial kits designed for dengue NS1 and anti-dengue IgM, IgG and IgA detection in urine and saliva clinical specimens

Anne-Claire Andries, Veasna Duong, Sivuth Ong, Sopheaktra Ros, Anavaj Sakuntabhai, Paul Horwood, Philippe Dussart, Philippe Buchy.

BMC Infectious Diseases. 2016;16(1):201. DOI: 10.1186/s12879-016-1551-x

Evidence of human infection by a new mammarenavirus endemic to Southeastern Asia

Kim R. Blasdell*, Veasna Duong*, Marc Eloit, Fabrice Chretien, Sowath Ly, Vibol Hul, Vincent Deubel, Serge Morand, Philippe Buchy.

Elife. 2016;5. DOI: 10.7554/eLife.13135

Evidence of two distinct phylogenetic lineages of dog rabies virus circulating in Cambodia

Channa Mey*, Artem Metlin*, Veasna Duong, Sivuth Ong, Sotheary In, Paul F. Horwood, Jean-Marc Reynes, Hervé Bourhy, Arnaud Tarantola, Philippe Buchy.

Infection, Genetics and Evolution. 2016;38:55‑61. DOI: 10.1016/j.meegid.2015.12.011

Hepatitis E virus antibody prevalence, RNA frequency, and genotype among blood donors in Cambodia (Southeast Asia)

Janin Nouhin, Sophearot Prak, Yoann Madec, Hubert Barennes, Richard Weissel, Kimcheng Hok, Nicole Pavio, François Rouet.

Transfusion. 2016;56(10):2597‑601. DOI: 10.1111/trf.13731

Human Sentinel Surveillance of Influenza and Other Respiratory Viral Pathogens in Border Areas of Western Cambodia

Ans Timmermans, Melanie C. Melendrez, Youry Se, Ilin Chuang, Nou Samon, Nichapat Uthaimongkol, Chonticha Klungthong, Wudtichai Manasatienkij, Butsaya Thaisomboonsuk, Stuart D. Tyner, Sareth Rith, Viseth Srey Horm, Richard G. Jarman, Delia Bethell, Nitima Chanarat, Julie Pavlin, Tippa Wongstitwilairoong, Piyaporn Saingam, But Sam El, Mark M. Fukuda, Sok Touch, Ly Sovann, Stefan Fernandez, Philippe Buchy, Lon Chanthap, David Saunders.

PLOS ONE. Public Library of Science; 2016;11(3):e0152529. DOI: 10.1371/journal.pone.0152529

Intense circulation of A/H5N1 and other avian influenza viruses in Cambodian live-bird markets with serological evidence of sub-clinical human infections

Srey Viseth Horm, Arnaud Tarantola, Sareth Rith, Sowath Ly, Juliette Gambaretti, Veasna Duong, Phalla Y, San Sorn, Davun Holl, Lotfi Allal, Wantanee Kalpravidh, Philippe Dussart, Paul F. Horwood, Philippe Buchy.

Emerg Microbes Infect. 2016;5(7):e70. DOI: 10.1038/emi.2016.69

Intensive circulation of Japanese Encephalitis Virus in Peri-urban Sentinel Pigs near Phnom Penh, Cambodia

Julien Cappelle, Veasna Duong, Long Pring, Lida Kong, Maud Yakovleff, Didot Budi Prasetyo, Borin Peng, Rithy Choeung, Raphaël Duboz, Sivuth Ong, San Sorn, Philippe Dussart, Arnaud Tarantola, Philippe Buchy, Véronique Chevalier.

PLoS Negl Trop Dis. 2016;10(12). DOI: 10.1371/journal.pntd.0005149

Laboratory diagnostics in dog-mediated rabies: an overview of performance and a proposed strategy for various settings

Veasna Duong*, Arnaud Tarantola*, Sivuth Ong, Channa Mey, Rithy Choeung, Sowath Ly, Hervé Bourhy, Philippe Dussart**, Philippe Buchy**.

Int J Infect Dis. 2016;46:107‑14. DOI: 10.1016/j.ijid.2016.03.016

Long-Lasting Immune Protection and Other Epidemiological Findings after Chikungunya Emergence in a Cambodian Rural Community, April 2012

Beatriz Galatas*, Sowath Ly*, Veasna Duong, Kathy Baisley, Kunthy Nguon, Siam Chan, Rekol Huy, Sovann Ly, Sopheak Sorn, Leakhann Som, Philippe Buchy**, Arnaud Tarantola**.

PLoS Negl Trop Dis. Public Library of Science; 2016;10(1):e0004281. DOI: 10.1371/journal.pntd.0004281

Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia

Veasna Duong, Channa Mey, Marc Eloit, Huachen Zhu, Lucie Danet, Zhong Huang, Gang Zou, Arnaud Tarantola, Justine Cheval, Philippe Perot, Denis Laurent, Beat Richner, Santy Ky, Sothy Heng, Sok Touch, Ly Sovann, Rogier van Doorn, Thanh Tan Tran, Jeremy J Farrar, David E Wentworth, Suman R Das, Timothy B Stockwell, Jean-Claude Manuguerra, Francis Delpeyroux, Yi Guan, Ralf Altmeyer, Philippe Buchy.

Emerging Microbes & Infections. Taylor & Francis; 2016;5(1):1‑9. DOI: 10.1038/emi.2016.101

Seroepidemiology of Human Enterovirus 71 Infection among Children, Cambodia

Paul F. Horwood, Alessio Andronico, Arnaud Tarantola, Henrik Salje, Veasna Duong, Channa Mey, Sovann Ly, Philippe Dussart, Simon Cauchemez, Philippe Buchy.

Emerging Infectious Diseases journal – CDC. Volume 22, Number 1—January 2016.  DOI: 10.3201/eid2201.151323

Estimating the global burden of endemic canine rabies. Hampson K, Coudeville L, Lembo T, Sambo M, Kieffer A, Attlan M, Barrat J, Blanton JD, Briggs DJ, Cleaveland S, Costa P, Freuling CM, Hiby E, Knopf L, Leanes F, Meslin FX, Metlin A, Miranda ME, Müller T, Nel LH, Recuenco S, Rupprecht CE, Schumacher C, Taylor L, Vigilato MA, Zinsstag J, Dushoff J16; Global Alliance for Rabies Control Partners for Rabies Prevention. PLoS Negl Trop Dis. 2015 Apr 16;9(4):e0003709. doi: 10.1371/journal.pntd.0003709. eCollection 2015.

Safety, potential efficacy, and pharmacokinetics of specific polyclonal immunoglobulin F(ab’)₂ fragments against avian influenza A (H5N1) in healthy volunteers: a single-centre, randomised, double-blind, placebo-controlled, phase 1 study. Bal C, Herbreteau CH, Buchy P, Rith S, Zaid M, Kristanto W, Han V, Reynaud C, Granjard P, Lépine B, Durand C, Tambyah PA.  Lancet Infect Dis. 2015 Mar;15(3):285-92. doi: 10.1016/S1473-3099(14)71072-2. Epub 2015 Feb 5.

Rabies Vaccine and Rabies Immunoglobulin in Cambodia: Use and Obstacles to Use. Tarantola, A., S. Ly, S. In, S. Ong, Y. Peng, N. Heng and P. Buchy.  J Travel Med 22, no. 5 (2015): 348-52.

Recognition Determinants of Broadly Neutralizing Human Antibodies against Dengue Viruses. Rouvinski, A., P. Guardado-Calvo, G. Barba-Spaeth, S. Duquerroy, M. C. Vaney, C. M. Kikuti, M. E. Navarro Sanchez, W. Dejnirattisai, W. Wongwiwat, A. Haouz, C. Girard-Blanc, S. Petres, W. E. Shepard, P. Despres, F. Arenzana-Seisdedos, P. Dussart, J. Mongkolsapaya, G. R. Screaton and F. A. Rey. Nature 520, no. 7545 (2015): 109-13.

Orientia tsutsugamushi, agent of scrub typhus, displays a single metapopulation with maintenance of ancestral haplotypes throughout continental South East Asia. Wongprompitak, P., V. Duong, W. Anukool, L. Sreyrath, T. T. Mai, L. Gavotte, C. Moulia, E. Cornillot, P. Ekpo, Y. Suputtamongkol, P. Buchy and R. Frutos. Infect Genet Evol. 2015 Apr;31:1-8. doi: 10.1016/j.meegid.2015.01.005. Epub 2015 Jan 8.

Observational Study on Immune Response to Yellow Fever and Measles Vaccines in 9 to 15-Month Old Children. Is It Necessary to Wait 4 Weeks between Two Live Attenuated Vaccines? Michel, R., F. Berger, J. Ravelonarivo, P. Dussart, M. Dia, M. Nacher, S. Rogier, D. Moua, F. D. Sarr, O. M. Diop, A. A. Sall and L. Baril.  Vaccine 33, no. 20 (2015): 2301-6.

Dengue Viruses Cluster Antigenically but Not as Discrete Serotypes. Katzelnick, L. C., J. M. Fonville, G. D. Gromowski, J. Bustos Arriaga, A. Green, S. L. James, L. Lau, M. Montoya, C. Wang, L. A. VanBlargan, C. A. Russell, H. M. Thu, T. C. Pierson, P. Buchy, J. G. Aaskov, J. L. Munoz-Jordan, N. Vasilakis, R. V. Gibbons, R. B. Tesh, A. D. Osterhaus, R. A. Fouchier, A. Durbin, C. P. Simmons, E. C. Holmes, E. Harris, S. S. Whitehead and D. J. Smith.  Science 349, no. 6254 (2015): 1338-43.

Mortality in Cambodia: An 18-Month Prospective Community-Based Surveillance of All-Age Deaths Using Verbal Autopsies. Goyet, S., B. Rammaert, M. McCarron, V. Khieu, I. Fournier, P. Kitsutani, S. Ly, A. Mounts, W. G. Letson, P. Buchy and S. Vong. Asia Pac J Public Health. 2015; 27(2): NP2458-70. doi: 10.1177/1010539513514433. Epub 2013 Dec 19.

Differential Proteomic Analysis of Virus-Enriched Fractions Obtained from Plasma Pools of Patients with Dengue Fever or Severe Dengue. Fragnoud, R., M. Flamand, F. Reynier, P. Buchy, V. Duong, A. Pachot, G. Paranhos-Baccala and F. Bedin. BMC Infect Dis 15, no. 1 (2015): 518.

Asymptomatic Humans Transmit Dengue Virus to Mosquitoes. Duong, V., L. Lambrechts, R. E. Paul, S. Ly, R. S. Lay, K. C. Long, R. Huy, A. Tarantola, T. W. Scott, A. Sakuntabhai and P. Buchy. Proc Natl Acad Sci U S A 112, no. 47 (2015): 14688-93.

Safety, Potential Efficacy, and Pharmacokinetics of Specific Polyclonal Immunoglobulin F(Ab’)(2) Fragments against Avian Influenza a (H5n1) in Healthy Volunteers: A Single-Centre, Randomised, Double-Blind, Placebo-Controlled, Phase 1 Study. Bal, C., C. H. Herbreteau, P. Buchy, S. Rith, M. Zaid, W. Kristanto, V. Han, C. Reynaud, P. Granjard, B. Lepine, C. Durand and P. A. Tambyah.  Lancet Infect Dis 15, no. 3 (2015): 285-92.

Value of Routine Dengue Diagnostic Tests in Urine and Saliva Specimens. Andries, A. C., V. Duong, S. Ly, J. Cappelle, K. S. Kim, P. Lorn Try, S. Ros, S. Ong, R. Huy, P. Horwood, M. Flamand, A. Sakuntabhai, A. Tarantola and P. Buchy.  PLoS Negl Trop Dis 9, no. 9 (2015): e0004100.

2014

Co-circulation of dengue virus type 3 genotypes in Vientiane capital, Lao PDR. Lao M, Caro V, Thiberge JM, Bounmany P, Vongpayloth K, Buchy P, Duong V, Vanhlasy C, Hospied JM, Thongsna M, Choumlivong K, Vongkhamchanh P, Oudavong B, Brey PT, Grandadam M. PLoS One. 2014 Dec 31;9(12):e115569. doi: 10.1371/journal.pone.0115569.

Identification of molecular markers associated with alteration of receptor-binding specificity in a novel genotype of highly pathogenic avian influenza A(H5N1) viruses detected in Cambodia in 2013. Rith S, Davis CT, Duong V, Sar B, Horm SV, Chin S, Ly S, Laurent D, Richner B, Oboho I, Jang Y, Davis W, Thor S, Balish A, Iuliano AD, Sorn S, Holl D, Sok T, Seng H, Tarantola A, Tsuyuoka R, Parry A, Chea N, Allal L, Kitsutani P, Warren D, Prouty M, Horwood P, Widdowson MA, Lindstrom S, Villanueva J, Donis R, Cox N, Buchy P. J Virol. 2014 Dec;88(23):13897-909. doi: 10.1128/JVI.01887-14.

Evaluation of commercially available diagnostic tests for the detection of dengue virus NS1 antigen and anti-dengue virus IgM antibody. Hunsperger EA, Yoksan S, Buchy P, Nguyen VC, Sekaran SD, Enria DA, Vazquez S, Cartozian E, Pelegrino JL, Artsob H, Guzman MG, Olliaro P, Zwang J, Guillerm M, Kliks S, Halstead S, Peeling RW, Margolis HS.  Emerg Infect Dis. 2014 Oct 16;8(10):e3171. doi: 10.1371/journal.pntd.0003171. eCollection 2014.

A model for a chikungunya outbreak in a rural Cambodian setting: implications for disease control in uninfected areas. Robinson M, Conan A, Duong V, Ly S, Ngan C, Buchy P, Tarantola A, Rodó X.  PLoS Negl Trop Dis. 2014 Sep 11;8(9):e3120.

The approved pediatric drug suramin identified as a clinical candidate for the treatment of EV71 infection-suramin inhibits EV71 infection in vitro and in vivo. Ren P, Zou G, Bailly B, Xu S, Zeng M, Chen X, Shen L, Zhang Y, Guillon P, Arenzana-Seisdedos F, Buchy P, Li J, von Itzstein M, Li Q, Altmeyer R. Emerg Microbes Infect. 2014 Sep;3(9):e62. doi: 10.1038/emi.2014.60. Epub 2014 Sep 3.

Emergence and transmission of arbovirus evolutionary intermediates with epidemic potential. Stapleford KA, Coffey LL, Lay S, Bordería AV, Duong V, Isakov O, Rozen-Gagnon K, Arias-Goeta C, Blanc H, Beaucourt S, Haliloğlu T, Schmitt C, Bonne I, Ben-Tal N, Shomron N, Failloux AB, Buchy P, Vignuzzi M.  Cell Host Microbe. 2014 Jun 11;15(6):706-16. doi: 10.1016/j.chom.2014.05.008.

Epidemiology of leptospira transmitted by rodents in southeast Asia. Cosson JF, Picardeau M, Mielcarek M, Tatard C, Chaval Y, Suputtamongkol Y, Buchy P, Jittapalapong S, Herbreteau V, Morand S.  PLoS Negl Trop Dis. 2014 Jun 5;8(6):e2902. doi: 10.1371/journal.pntd.0002902. eCollection 2014 Jun.

Acute undifferentiated febrile illness in rural Cambodia: a 3-year prospective observational study. Mueller TC, Siv S, Khim N, Kim S, Fleischmann E, Ariey F, Buchy P, Guillard B, González IJ, Christophel EM, Abdur R, von Sonnenburg F, Bell D, Menard D. PLoS One. 2014 Apr 22;9(4):e95868. doi: 10.1371/journal.pone.0095868.

DNA prime and virus-like particle boost from a single H5N1 strain elicits broadly neutralizing antibody responses against head region of H5 hemagglutinin.  Wang G, Zhou F, Buchy P, Zuo T, Hu H, Liu J, Song Y, Ding H, Tsai C, Chen Z, Zhang L, Deubel V, Zhou P. J Infect Dis. 2014 Mar 1;209(5):676-85. doi: 10.1093/infdis/jit414.

Influenza seasonality and vaccination timing in tropical and subtropical areas of southern and south-eastern Asia. Saha S, Chadha M, Al Mamun A, Rahman M, Sturm-Ramirez K, Chittaganpitch M, Pattamadilok S, Olsen SJ, Sampurno OD, Setiawaty V, Pangesti KN, Samaan G, Archkhawongs S, Vongphrachanh P, Phonekeo D, Corwin A, Touch S, Buchy P, Chea N, Kitsutani P, Mai le Q, Thiem VD, Lin R, Low C, Kheong CC, Ismail N, Yusof MA, Tandoc A 3rd, Roque V Jr, Mishra A, Moen AC, Widdowson MA, Partridge J, Lal RB. Bull World Health Organ. 2014; 92(5): 318-30. doi: 10.2471/BLT.13.124412. Epub 2014 Feb 24.

Laboratory Diagnosis of Dengue. Guzman MG, Buchy P, Enria D, Vazquez S. In: Dengue and dengue hemorrhagic fever. DJ Gubler and G. Kuno eds. CABI Publishing, 2014.

Spatial epidemiology and climatic predictors of paediatric dengue infections captured via sentinel site surveillance, Phnom Penh Cambodia 2011-2012. Lover AA, Buchy P, Rachline A, Moniboth D, Huy R, Meng CY, Leo YS, Yuvatha K, Sophal U, Chantha N, Y B, Duong V, Goyet S, Brett JL, Tarantola A, Cavailler P. BMC Public Health. 2014; 14:658. doi: 10.1186/1471-2458-14-658.

The approved pediatric drug suramin identified as a clinical candidate for the treatment of EV71 infection — suramin inhibits EV71 infection in vitro and in vivo. Ren P, Gang Z, Bailly B, Xu S, Zeng M, Chen X, Shen L, Zhang Y, Guillon P, Arenzana-Seisdedos F, Buchy P, Li J, von Itzstein M, Li Q, Altmeyer R. Emerging Microbes and Infections (2014) 3, e62; doi:10.1038/emi.2014.60.

Epidemiological and virological characteristics of influenza viruses circulating in Cambodia from 2009 to 2011. Horm SV, Mardy S, Rith S, Ly S, Heng S, Vong S, Kitsutani P, Ieng V, Tarantola A, Ly S, Sar B, Chea N, Sokhal B, Barr I, Kelso A, Horwood PF, Timmermans A, Hurt A, Lon C, Saunders D, Ung SA, Asgari N, Roces MC, Touch S, Komadina N, Buchy P. PLoS One. 2014; 9(10):e110713. doi: 10.1371/journal.pone.0110713.

Dengue Research Funded by the European Commission-Scientific Strategies of Three European Dengue Research Consortia. Jaenisch T, IDAMS, Sakuntabhai A, DENFREE, Wilder-Smith A, DengueTools. PLoS Negl Trop Dis. 2014; 8(4): e2883.

Epidemiological analysis of influenza A infection in Cambodian pigs and recommendations for surveillance strategies. Netrabukkana P, Cappelle J, Trevennec C, Roger F, Goutard F, Buchy P, Robertson I, Fenwick S. Transbound Emerg Dis. 2014; doi: 10.111/tbed.12204.

Specific polyclonal F(ab’)2 neutralize a large panel of highly pathogenic avian influenza A viruses (H5N1) and control infection in mice. Herbreteau CH, Jacquot F, Rith S, Vacher L, Nguyen L, Carbonnelle C, Lotteau V, Jolivet M, Raoul H, Buchy P, Saluzzo JF. Immunotherapy. 2014;6(6):699-708. doi: 10.2217/imt.14.40.

Estimating the burden of Japanese encephalitis virus and other encephalitides in countries of the mekong region. Tarantola A, Goutard F, Newton P, de Lamballerie X, Lortholary O, Cappelle J, Buchy P. PLoS Negl Trop Dis. 2014 Jan 30;8(1):e2533. doi: 10.1371/journal.pntd.0002533.er encephalitides in countries of the mekong region. 

A study of the genetic variability of human respiratory syncytial virus (HRSV) in Cambodia reveals the existence of a new HRSV group B genotype. Arnott A, Vong S, Mardy S, Chu S, Naughtin M, Sovann L, Buecher C, Beauté J, Rith S, Borand L, Asgari N, Frutos R, Guillard B, Touch S, Deubel V, Buchy P.  J ClinMicrobiol. 2011 Oct;49(10):3504-13. doi: 10.1128/JCM.01131-11. Epub 2011 Aug 24.

2013

Acute lower respiratory infections on lung sequelae in Cambodia, a neglected disease in highlytuberculosis-endemic country. Rammaert B, Goyet S, Tarantola A, Hem S, Rith S, Cheng S, Te V, Try PL, Guillard B, Vong S, Mayaud C, Buchy P, Borand L. Respir Med. 2013 Oct;107(10):1625-32. doi: 10.1016/j.rmed.2013.07.018. Epub 2013 Aug 9.

Respiratory virus infections in hospitalized children and adults in Lao PDR. Sentilhes AC, Choumlivong K, Celhay O, Sisouk T, Phonekeo D, Vongphrachanh P, Brey P, Buchy P.  Influenza Other Respi Viruses.2013 Nov;7(6):1070-8. doi: 10.1111/irv.12135. Epub 2013 Jun 25

Diversity of Orientia tsutsugamushi clinical isolates in Cambodia reveals active selection and recombination process. Duong V, Blasdell K, Mai TT, Sreyrath L, Gavotte L, Frutos R, Buchy P. Infect Genet Evol. 2013 Apr;15:25-34. doi: 10.1016/j.meegid.2010.08.015. Epub 2010 Sep 18.

Molecular epidemiology of Orientiatsutsugamushi in Cambodia and Central Vietnam reveals a broad region-wide genetic diversity. Duong V, Mai TT, Blasdell K, Lo LV, Morvan C, Lay S, Anukool W, Wongprompitak P, Suputtamongkol Y, Laurent D, Richner B, Ra C, Chien BT, Frutos R, Buchy P.  Infect Genet Evol. 2013 Apr;15:35-42. doi: 10.1016/j.meegid.2011.01.004. Epub 2011 Jan 15.

Broad-coverage molecular epidemiology of Orientiatsutsugamushi in Thailand. Wongprompitak P, Anukool W, Wongsawat E, Silpasakorn S, Duong V, Buchy P, Morand S, Frutos R, Ekpo P, Suputtamongkol Y. Infect Genet Evol. 2013 Apr;15:53-8. doi: 10.1016/j.meegid.2011.06.008. Epub 2011 Jun 25.

Genetic diversity and lineage dynamic of dengue virus serotype 1 (DENV-1) in Cambodia. Duong V, Simmons C, Gavotte L, Viari A, Ong S, Chantha N, Lennon NJ, Birren BW, Vong S, Farrar JJ, Henn MR, Deubel V, Frutos R, Buchy P. Infect Genet Evol. 2013 Apr;15:59-68. doi: 10.1016/j.meegid.2011.06.019. Epub 2011 Jul 2.

Biased mutational pattern and quasispecies hypothesis in H5N1 virus. Gutiérrez RA, Viari A, Godelle B, Frutos R, Buchy P. Infect Genet Evol. 2013 Apr;15:69-76. doi: 10.1016/j.meegid.2011.10.019. Epub 2011 Oct 29.

Seasonal influenza vaccine policies, recommendations and use in the World Health Organization’s Western Pacific Region.  Members of the Western Pacific region Global Influenza Surveillance and Response System.Western Pac Surveill Response J. 2013 Mar 3;4(3):51-9. doi: 10.5365/WPSAR.2013.4.1.009. eCollection 2013 Jul-Sep.

Human bocavirus (HBoV) amongst an all-ages population hospitalized with acute lower respiratory infections in Cambodia. Influenza and Other Respiratory Viruses.Arnott A, Vong S, Rith S, Naughtin M, Ly S, Guillard B, Deubel V, Buchy P.  2013 Mar; 7(2): 201-10. doi: 10.1111/j.1750-2659.2012.00369.x.

Acute lower respiratory infections in >=5 year-old hospitalized patients in Cambodia, a low-income tropical country: clinical characteristics and pathogenic etiology. Vong S, Guillard B, Borand L, Rammaert B, Goyet S, Te V, Lorn Try P, Hem S, Rith S, Ly S, Cavailler P, Mayaud C, Buchy P. BMC Infect Dis. 2013 Feb 22; 13(1): 97.

Dynamic of H5N1 virus in Cambodia and emergence of a novel endemic sub-clade. Sorn S, Sok T, Ly S, Rith S, Tung N, Viari A, Gavotte L, Holl D, Seng H, Asgari N, Richner B, Laurent D, Chea N, Duong V, Toyoda T, Yasuda CY, Kitsutani P, Zhou P, Bing S, Deubel V, Donis R, Frutos R, Buchy P. Infect Genet Evol. 2013 Apr;15:87-94. doi: 10.1016/j.meegid.2012.05.013.

First introduction of pandemic influenza A/H1N1 and detection of respiratory viruses in pediatric patients in Central African Republic. Nakoune E, Tricou V, Manirakiza A, Komoyo F, Selekon B, Gody JC, Victoir K, Buchy P, Kazanji M. Virol. J. 2013 Feb 8; 10(1):49. . doi: 10.1186/1743-422X-10-49.

Influenza A(H5N1) Virus Surveillance at Live Poultry Markets, Cambodia, 2011. Horm SV, Sorn S, Allal L, Buchy P. Emerg Infect Dis. 2013 Feb;19(2):305-8.

Influenza antiviral resistance in the Asia-Pacific region during 2011. Duong V, Henn MR, Simmons C, Ngan C, Y B, Gavotte L, Viari A, Ong S, Huy R, Lennon NJ, Ly S, Vong S, Birren BW, Farrar JJ, Deubel V, Frutos R, Buchy P.  Infect Genet Evol. 2013; 15:77-86. doi: 10.1016/j.meegid.2012.05.012.

Complex dynamic of dengue virus serotypes 2 and 3 in Cambodia following series of climate disasters. Arnott A, Vong S, Sek M, Naughtin M, Beauté J, Rith S, Guillard B, Deubel V, Buchy P. Infect Genet Evol. 2013 Apr;15:43-52. doi: 10.1016/j.meegid.2011.01.016. Epub 2011 Feb 1.

Genetic variability of human metapneumovirus amongst an all ages population in Cambodia between 2007 and 2009. Rith S, Netrabukkana P, Sorn S, Mumford E, Mey C, Holl D, Goutard F, Y B, Fenwick S, Robertson I, Roger F, Buchy P.  Influenza Other Respi Viruses 2013; 7(3): 271-9. doi: 10.1111/j.1750-2659.2012.00382.

Serologic evidence of human influenza virus infections in swine populations, Cambodia. Rith S, Netrabukkana P, Sorn S, Mumford E, Mey C, Holl D, Goutard F, Y B, Fenwick S, Robertson I, Roger F, Buchy P. Influenza Other Respi Viruses 2013; 7(3): 271-9. doi: 10.1111/j.1750-2659.2012.00382.

Only a sixth of animal bite victims in India get antirabies treatment. Tarantola A, Ly S, In S, Deubel V, Buchy P. BMJ. 2013 Oct 7;347:f6040. doi: 10.1136/bmj.f6040.

Viral elution and concentration method for detection of influenza A viruses in mud by real-time RT-PCR. Deboosere N, Horm SV, Delobel A, Gachet J, Buchy P, Vialette M. J Virol Methods. 2012 Jan;179(1):148-53.

Acute viral lower respiratory tract infections in cambodian children: clinical and epidemiologic characteristics. Guerrier G, Goyet S, Chheng ET, Rammaert B, Borand L, Te V, Try PL, Sareth R, Cavailler P, Mayaud C, Guillard B, Vong S, Buchy P, Tarantola A.  Pediatr Infect Dis J. 2013 Jan;32(1):e8-e13.

2012

Field Evaluation and Impact on Clinical Management of a Rapid Diagnostic Kit That Detects Dengue NS1, IgM and IgG. Andries AC, Duong V, Ngan C, Ong S, Huy R, Sroin KK, Te V, Y B, Try PL, Buchy P.  PLoS Negl Trop Dis. 2012 Dec 27;6(12):e1993.

Reemergence of Chikungunya virus in Cambodia. Duong V, Andries AC, Ngan C, Sok T, Richner B, Asgari-Jirhandeh N, Bjorge S, Huy R, Ly S, Laurent D, Hok B, Roces MC, Ong S, Char MC, Deubel V, Tarantola A, Buchy P. Emerg Infect Dis. 2012 Dec;18(12):2066-9.

A single residue substitution in the receptor-binding domain of H5N1 hemagglutinin is critical for packaging into pseudotyped lentiviral particles. Tang DJ, Lam YM, Siu YL, Lam CH, Chu SL, Peiris JS, Buchy P, Nal B, Bruzzone R. PLoS One. 2012 Nov 2;7(11):e43596.

Environment: a potential source of animal and human infection with influenza A (H5N1) virus.  Horm SV, Gutiérrez RA, Sorn S, Buchy P. Influenza Other Respi Viruses. 2012 Nov;6(6):442-8.

Chikungunya Outbreak — Cambodia, February–March 2012. Sowath Ly, PhD, Sopheak Sorn, MA, Arnaud Tarantola, MD, Epidemiology and Public Health Unit; Lydie Canier, MSc, Molecular Epidemiology and Malariology Unit; Philippe Buchy, PhD, Veasna Duong, PhD, Virology Unit, Institut Pasteur du Cambodge, Phnom Penh, Cambodia. Ilin Chuang, MD, Steven Newell, PhD, U.S. Naval Medical Research Unit 2, Phnom Penh, Cambodia. Sovann Ly, MD, Touch Sok, MD, Vandy Som, MD, Communicable Disease Control Dept; Meng Chuor Char, MD, Chantha Ngan, MD, National Center for Malaria Control, Parasitology and Entomology, Ministry of Health of Cambodia. Leakhann Som, MD, Kampong Speu Provincial Health Dept, Kampong Speu, Cambodia. Maria Concepcion Roces, MD, World Health Organization, Phnom Penh, Cambodia. Chikungunya Outbreak — Cambodia, February–March 2012. September 21, 2012 / 61(37);737-740.

Estimated global mortality associated with the first 12 months of 2009 pandemic influenza A H1N1 virus circulation: a modelling study. Dawood FS, Iuliano AD, Reed C, Meltzer MI, Shay DK, Cheng PY, Bandaranayake D, Breiman RF, Brooks WA, Buchy P, Feikin DR, Fowler KB, Gordon A, Hien NT, Horby P, Huang QS, Katz MA, Krishnan A, Lal R, Montgomery JM, Mølbak K, Pebody R, Presanis AM, Razuri H, Steens A, Tinoco YO, Wallinga J, Yu H, Vong S, Bresee J, Widdowson MA. Lancet Infect Dis. 2012 Sep;12(9):687-95. Erratum in: Lancet Infect Dis. 2012 Sep;12(9):655.

Contaminated soil and transmission of influenza virus (H5N1). Gutiérrez RA, Buchy P.  Emerg Infect Dis. 2012 Sep;18(9):1530-2.

Epidemiological and virological characteristics of influenza in the Western Pacific Region of the World Health Organization, 2006-2010. Barr I, Hurt A, Kelso A, Reading P, Ly S, Seng H, Buchy P, Ung SA, Shu Y, Xu C, Xu Z, Wang D, Kama M, Singh P, Fujisaki S, Odagiri T, Tashiro M, Archkhawongs S, Khamphaphongphanh B, Vongphrachanh P, Kheong CC, Ismail N, Burmaa A, Darmaa B, Nymadawa P, Grangeon JP, Gourinat AC, Huang QS, Lopez LD, Lopez JM, Olveda RM, Roque V, Jennings L, Kang C, Lin C, Lin R, Tee WS, Balish A, Corwin A, Kapella BK, Kitsutani P, McFarland J, Moen A, Xu X, Hoang VM, Long NL, Mai le Q, Nguyen le KH, Nguyen HA, Nguyen TL, Nguyen TN, Asgari N, Dawainavesi A, Denehy EJ, Dominguez MN, Jamsran M, Kasai T, Kool J, Lewis H, Luo D, Olowokure B, Partridge J, Pavlin B, Samaan G, Singh H, Tsuyuoka R, Vakacegu A, Zhang W. Western Pacific Region Global Influenza Surveillance and Response System. PLoS One. 2012;7(5):e37568. doi: 10.1371/journal.pone.0037568. Epub 2012 May 29.

PA from an H5N1 highly pathogenic avian influenza virus activates viral transcription and replication and induces apoptosis and interferon expression at an early stage of infection. Wang Q, Zhang S, Jiang H, Wang J, Weng L, Mao Y, Sekiguchi S, Yasui F, Kohara M, Buchy P, Deubel V, Xu K, Sun B, Toyoda T. Virol J. 2012 Jun 8;9:106. doi: 10.1186/1743-422X-9-106.

Leptospira and rodents in Cambodia: environmental determinants of infection. Ivanova S, Herbreteau V, Blasdell K, Chaval Y, Buchy P, Guillard B, Morand S. Am J Trop Med Hyg. 2012 Jun;86(6):1032-8. doi: 10.4269/ajtmh.2012.11-0349.

A triclade DNA vaccine designed on the basis of a comprehensive serologic study elicits neutralizing antibody responses against all clades and subclades of highly pathogenic avian influenza H5N1 viruses. Zhou F, Wang G, Buchy P, Cai Z, Chen H, Chen Z, Cheng G, Wan XF, Deubel V, Zhou P.  J Virol. 2012 Jun;86(12):6970-8.

Amino acids 473V and 598P of PB1 from an avian origin influenza A virus contribute to polymerase activity especially in mammalian cells. Xu C, Hu WB, Xu K, He YX, Wang TY, Chen Z, Li TX, Liu JH, Buchy P, Sun B. J Gen Virol. 2012 Mar;93(Pt 3):531-40. doi: 10.1099/vir.0.036434-0. Epub 2011 Nov 16.

A human antibody recognizing a conserved epitope of H5 hemagglutinin broadly neutralizes highly pathogenic avian influenza H5N1 viruses. Hu H, Voss J, Zhang G, Buchy P, Zuo T, Wang L, Wang F, Zhou F, Wang G, Tsai C, Calder L, Gamblin SJ, Zhang L, Deubel V, Zhou B, Skehel JJ, Zhou P. J Virol. 2012 Mar;86(6):2978-89

Under-recognition and reporting of dengue in Cambodia: a capture-recapture analysis of the National Dengue Surveillance System. Vong S, Goyet S, Ly S, Ngan C, Huy R, Duong V, Wichmann O, Letson GW, Margolis HS, Buchy P.  Epidemiol Infect. 2012 Mar;140(3):491-9. doi: 10.1017/S0950268811001191. Epub 2011 Jun 21.

Highly pathogenic influenza A(H5N1) virus survival in complex artificial aquatic biotopes. Horm VS, Gutiérrez RA, Nicholls JM, Buchy P.  PLoS One. 2012;7(4):e34160.

Viral elution and concentration method for detection of influenza A viruses in mud by real-time RT-PCR. Deboosere N, Horm SV, Delobel A, Gachet J, Buchy P, Vialette M.  J Virol Methods. 2012 Jan;179(1):148-53. doi: 10.1016/j.jviromet.2011.10.013. Epub 2011 Oct 20.

A specific and sensitive antigen capture assay for NS1 protein quantitation in Japanese encephalitis virus infection. Li YZ, Counor D, Lu P, Liang GD, Vu TQ, Phan TN, Huynh TK, Sun G, Grandadam M, Butrapet S, Lavergne JP, Flamand M, Yu YX, Solomon T, Buchy P, Deubel V. J Virol Methods. 2012 Jan;179(1):8-16. doi: 10.1016/j.jviromet.2011.06.008. Epub 2011 Jun 15.

Clinical and virological study of dengue cases and the members of their households: the multinational DENFRAME Project. Dussart P, Baril L, Petit L, Beniquel L, Quang LC, Ly S, Azevedo Rdo S, Meynard JB, Vong S, Chartier L, Diop A, Sivuth O, Duong V, Thang CM, Jacobs M, Sakuntabhai A, Nunes MR, Huong VT, Buchy P, Vasconcelos PF. PLoS Negl Trop Dis. 2012 Jan;6(1):e1482.

Klebsiella pneumoniae related community-acquired acute lower respiratory infections in Cambodia: clinical characteristics and treatment. Rammaert B, Goyet S, Beauté J, Hem S, Te V, Try PL, Mayaud C, Borand L, Buchy P, Guillard B, Vong S. BMC Infect Dis. 2012 Jan 10;12:3.

The global burden of respiratory infections due to seasonal influenza in young children: a systematic review and meta-analysis. H Nair, WA Brooks, M Katz, A Roca, JA Berkley, SA Madhi, JM Simmerman, A Gordon, M Sato, S Howie, A Krishnan, M Ope, KA Lindblade, P Carosone-Link, M Lucero, W Ochieng, L Kamimoto, E Dueger, N Bhat, S Vong, E Theodoratou, M Chittaganpitch, O Chimah, A Balmaseda, P Buchy, E Harris, V Evans, M Katayose, B Gaur, C O’Callaghan-Gordo, D Goswami, W Arvelo, M Venter, T Briese, R Tokarz, MA Widdowson, AW Mounts, RF Breiman, DR Feikin, KP Klugman, SJ Olsen, BD Gessner, PF Wright, I Rudan, S Broor, EAF Simões, H Campbell.  Lancet. 2011 Dec 3;378(9807):1917-30. doi: 10.1016/S0140-6736(11)61051-9. Epub 2011 Nov 10.

Performance of the CareStart™ G6PD deficiency screening test, a point-of-care diagnostic for primaquine therapy screening. Kim S, Nguon C, Guillard B, Duong S, Chy S, Sum S, Nhem S, Bouchier C, Tichit M, Christophel E, Taylor WR, Baird JK, Menard D.  PLoS One. 2011;6(12):e28357. doi: 10.1371/journal.pone.0028357. Epub 2011 Dec 2.

Eurasian Tree Sparrows, Risk for H5N1 Virus Spread and Human Contamination through Buddhist Ritual: An Experimental Approach. Gutiérrez RA, Sorn S, Nicholls JM, Buchy P.  PLoS One. 2011;6(12):e28609. Epub 2011 Dec 2.

Global burden of respiratory infections due to seasonal influenza in young children: a systematic review and meta-analysis Nair H, Brooks WA, Katz M, Roca A, Berkley JA, Madhi SA, Simmerman JM, Gordon A, Sato M, Howie S, Krishnan A, Ope M, Lindblade KA, Carosone-Link P, Lucero M, Ochieng W, Kamimoto L, Dueger E, Bhat N, Vong S, Theodoratou E, Chittaganpitch M, Chimah O, Balmaseda A, Buchy P, Harris E, Evans V, Katayose M, Gaur B, O’Callaghan-Gordo C, Goswami D, Arvelo W, Venter M, Briese T, Tokarz R, Widdowson MA, Mounts AW, Breiman RF, Feikin DR, Klugman KP, Olsen SJ, Gessner BD, Wright PF, Rudan I, Broor S, Simões EA, Campbell H.  Lancet. 2011 Dec 3;378(9807):1917-30. doi: 10.1016/S0140-6736(11)61051-9. Epub 2011 Nov 10.

Rodent-Borne Hantaviruses in Cambodia, Lao PDR, and Thailand. Blasdell K, Cosson JF, Chaval Y, Herbreteau V, Douangboupha B, Jittapalapong S, Lundqvist A, Hugot JP, Morand S, Buchy P.  Ecohealth. 2011 Dec;8(4):432-43. doi: 10.1007/s10393-011-0725-7. Epub 2011 Nov 29.

Phenotypic and genotypic characterization of dengue virus isolates differentiates dengue fever and dengue hemorrhagic fever from dengue shock syndrome. Tuiskunen A, Monteil V, Plumet S, Boubis L, Wahlström M, Duong V, Buchy P, Lundkvist A, Tolou H, Leparc-Goffart I. Arch Virol. 2011 Nov;156(11):2023-32. doi: 10.1007/s00705-011-1100-2. Epub 2011 Sep 16.

Evidence of Japanese encephalitis virus infections in swine populations in 8 provinces of Cambodia: implications for national Japanese encephalitis vaccination policy. Duong V, Sorn S, Holl D, Rani M, Deubel V, Buchy P.  Acta Trop. 2011 Oct-Nov;120(1-2):146-50. doi: 10.1016/j.actatropica.2011.07.008. Epub 2011 Jul 22.

A study of the genetic variability of human respiratory syncytial virus (HRSV) in Cambodia reveals the existence of a new HRSV group B genotype. Arnott A, Vong S, Mardy S, Chu S, Naughtin M, Sovann L, Buecher C, Beauté J, Rith S, Borand L, Asgari N, Frutos R, Guillard B, Touch S, Deubel V, Buchy P. J ClinMicrobiol. 2011 Oct;49(10):3504-13. doi: 10.1128/JCM.01131-11. Epub 2011 Aug 24.

Direct detection of highly pathogenic avian influenza A/H5N1 virus from mud specimens. Horm SV, Deboosere N, Gutiérrez RA, Vialette M, Buchy P.  J Virol Methods. 2011 Sep;176(1-2):69-73. doi: 10.1016/j.jviromet.2011.06.002. Epub 2011 Jun 12.

Phenotypic characterization of patient dengue virus isolates in BALB/c mice differentiates dengue fever and dengue hemorrhagic fever from dengue shock syndrome. Tuiskunen A, Wahlström M, Bergström J, Buchy P, Leparc-Goffart I, Lundkvist A. Virol J. 2011 Aug 11;8:398. doi: 10.1186/1743-422X-8-398.

Clinical and virological factors influencing the performance of a NS1 antigen-capture assay and potential use as a marker of dengue disease severity. Duong V, Ly S, Lorn Try P, Tuiskunen A, Ong S, Chroeung N, Lundkvist A, Leparc-Goffart I, Deubel V, Vong S, Buchy P. PLoSNegl Trop Dis. 2011 Jul;5(7):e1244. doi: 10.1371/journal.pntd.0001244. Epub 2011 Jul 19.

Development and validation of a concentration method for the detection of influenza a viruses from large volumes of surface water. Deboosere N, Horm SV, Pinon A, Gachet J, Coldefy C, Buchy P, Vialette M.  Appl Environ Microbiol. 2011 Jun;77(11):3802-8. doi: 10.1128/AEM.02484-10. Epub 2011 Apr 15

Pulmonary melioidosis in Cambodia: a prospective study. Rammaert B, Beauté J, Borand L, Hem S, Buchy P, Goyet S, Overtoom R, Angebault C, Te V, Try PL, Mayaud C, Vong S, Guillard B.  BMC Infect Dis. 2011 May 14;11:126. doi: 10.1186/1471-2334-11-126.

Neuraminidase inhibitor sensitivity and receptor-binding specificity of Cambodian clade 1 highly pathogenic H5N1 influenza virus. Naughtin M, Dyason JC, Mardy S, Sorn S, von Itzstein M, Buchy P.  Antimicrob Agents Chemother. 2011 May;55(5):2004-10. doi: 10.1128/AAC.01773-10. Epub 2011 Feb 22.

Dengue in Thailand and Cambodia: an assessment of the degree of underrecognized disease burden based on reported cases. Wichmann O, Yoon IK, Vong S, Limkittikul K, Gibbons RV, Mammen MP, Ly S, Buchy P, Sirivichayakul C, Buathong R, Huy R, Letson GW, Sabchareon A. PLoSNegl Trop Dis. 2011 Mar 29;5(3):e996. doi: 10.1371/journal.pntd.0000996.

Heterosubtypic antibody response elicited with seasonal influenza vaccine correlates partial protection against highly pathogenic H5N1 virus. Ding H, Tsai C, Zhou F, Buchy P, Deubel V, Zhou P. PLoS One. 2011 Mar 25;6(3):e17821. doi: 10.1371/journal.pone.0017821.

Superior neutralizing antibody response and protection in mice vaccinated with heterologous DNA prime and virus like particle boost against HPAI H5N1 virus Ding H, Tsai C, Gutiérrez RA, Zhou F, Buchy P, Deubel V, Zhou P.  PLoS One. 2011 Jan 28;6(1):e16563. doi: 10.1371/journal.pone.0016563.

Clinical characterization, diagnosis and socioeconomic impact of hospitalized dengue in Cambodia. Suaya JA, Chantha N, Huy R, Sah BK, Chang MS, Socheat D, Buchy P, Vantha T, Ong S, Haileselassie E, Shepard DS. Dengue Bulletin. 2010 Dec; 34: 89-103.

Dengue: a continuing global threat. Guzman MG, Halstead SB, Artsob H, Buchy P, Farrar J, Gubler DJ, Hunsperger E, Kroger A, Margolis HS, Martinez E, Nathan MB, Pelegrino JL, Simmons C, Yoksan S, Peeling RW. Nature Reviews Microbiology, 2010 Dec;8(12 Suppl):S7-16. doi: 10.1038/nrmicro2460.

Evaluation of diagnostic tests: dengue. Peeling RW, Artsob H, Pelegrino JL, Buchy P, Cardosa MJ, Devi S, Enria DA, Farrar J, Gubler DJ, Guzman MG, Halstead SB, Hunsperger E, Kliks S, Margolis HS, Nathanson CM, Nguyen VC, Rizzo N, Vázquez S, Yoksan S.  Nat Rev Microbiol. 2010 Dec;8(12 Suppl):S30-8.

Dengue disease burden in urban and rural Cambodia: results from population-based active fever surveillance. Vong S, Khieu V, Glass O, Ly S, Ong S, Huy R, Ngan C, Wichmann O, Letson WG, Margolis HS, Buchy P.  PLoS Trop Neglect Dis. 2010 Nov 30;4(11):e903. doi: 10.1371/journal.pntd.0000903.

Molecular monitoring of causative viruses in child acute respiratory infection in endemo-epidemic situations in Shanghai. Wang W, Cavailler P, Ren P, Zhang J, Dong W, Yan H, Mardy S, Cailhol J, Buchy P, Sheng J, Fontanet A, Deubel V.  J Clin Virol. 2010 Nov;49(3):211-8. doi: 10.1016/j.jcv.2010.08.005. Epub 2010 Sep 19.

Use of multiplex PCR/RT-PCR approach to assess the viral causes of influenza-like illnesses in Cambodia during three consecutive dry seasons. Buecher C, Mardy S, Wang W, Duong V, Vong S, Vabret A, Freymuth F, Deubel V, Buchy P. J. Med. Virol. 2010 Oct;82(10):1762-72. doi: 10.1002/jmv.21891.

National dengue surveillance in Cambodia, 1980-2008: Insights on epidemiological and virological trends and impact of vector control intervention. Huy R, Buchy P, Conan A, Ngan C, Ong S, Ali R, Veasna D, Sunnara Y, Ung S, Te V, Chroeung N, Pheaktra NC, Uok V, Vong S. Bull WHO. 2010 Sep 1;88(9):650-7. doi: 10.2471/BLT.09.073908. Epub 2010 Apr 7.

Genome-wide expression profiling deciphers host response altered during dengue shock syndrome and reveals the role of innate immunity in severe dengue. Devignot S, Sapet C, Duong V, Bergon A, Rihet P, Ong S, Lorn P, Chroeung N, Ngeav S, Tolou H, Buchy P, Couissinier-Paris P. PLoS One. 2010 Jul 20;5(7):e11671. doi: 10.1371/journal.pone.0011671.

Emergence of the Asian I genotype of dengue virus serotype 2 in Vietnam: in vivo fitness advantage and selectively mediated lineage replacement across South-East Asia. Vu TT, Homes EC, Duong V, Nguyen TQ, Tran TH, Quail M, Churcher C, Parkhill J, Cardosa J, Farrar J, Wills B, Lennon NJ, Birren BW, Buchy P, Henn M, Simmons CP.  PLoS Trop Neglect Dis. 2010 Jul 20;4(7):e757. doi: 10.1371/journal.pntd.0000757.

Seroprevalence of anti-H5 antibody rural Cambodia, 2007. Cavailler P, Chu S, Ly S, Garcia JM, Ha DQ, Bergeri I, Som L, Ly S, Sok T, Vong S, Buchy P. J Clin Virol. 2010 Jun;48(2):123-6. doi: 10.1016/j.jcv.2010.02.021. Epub 2010 Mar 30.

Kinetics of neutralizing antibodies in patients naturally infected by H5N1 virus. Buchy P, Vong S, Chu S, Garcia JM, Hien TT, Hien VM, Channa N, Ha DQ, Chau NV, Simmons C, Farrar JJ, Peiris M, de Jong MD. PLoS One. 2010 May 27;5(5):e10864. doi: 10.1371/journal.pone.0010864.

Specific nucleic acid detection using photophysical properties of quantum dot probes. Lim SH, Buchy P, Mardy S, Kang MS, Yu AD.  Anal Chem. 2010 Feb 1;82(3):886-91. doi: 10.1021/ac902039n.

Genetic dynamics analysis and reassortment detection in seasonal influenza A viruses circulating in Cambodia from 2005 to 2008. Fourment M, Mardy S, Channa M, Buchy P. J Clin Microbiol. 2010; 48:295-7.

A description of influenza-like illness (ILI) sentinel surveillance in Cambodia, 2006-2008. Sreng B, Touch S, Sovann L, Heng S, Rathmony H, Huch C, Chea N, Kosal S, Siriarayaporn P, Pathanapornpandh N, Rehmet S, Cavailler P, Vong S, Buchy P.  Southeast Asian J Trop Med Public Health. 2010 Jan;41(1):97-104.

Virologic and immunologic outcomes in HIV-infected Cambodian children after 18 months of highly active antiretroviral therapy (HAART) 2010.. Sophan S, Meng CY, Pean P, Harwell J, Hutton E, Trzmielina S, Somasundaran M, Luzuriaga K, Pugatch D. Southeast Asian J Trop Med Public Health. 2010 Jan;41(1):126-37.

Biochemical and kinetic analysis of influenza virus RNA polymerase purified from insect cells. Biochemical and Biophysical Research Communications. Zhang S, Weng L, Geng L, Wang J, Zhou J, Deubel V, Buchy P, Toyoda T. Biochemical and Biophysical Research Communications. 2010 Jan 1;391(1):570-4. doi: 10.1016/j.bbrc.2009.11.100. Epub 2009 Nov 20.

Simultaneous detection of respiratory viruses in children with acute respiratory infection using two different multiplex transcription-PCR assay. Wang W, Ren P, Sheng J, Mardy S, Yan H, Zhang J, Hou L, Vabret A, Buchy P, Freymuth F, Deubel V.  J Virol Methods. 2009 Dec;162(1-2):40-5. doi: 10.1016/j.jviromet.2009.07.004. Epub 2009 Jul 26.

Measurement of neutralizing antibody responses against H5N1 clades in immunized mice and ferrets using pseudotypes expressing influenza hemagglutinin and neuraminidase. Tsai C, Caillet C, Hu H, Zhou F, Ding H, Zhang G, Zhou B, Wang S, Lu S, Buchy P, Deuvel V, Vogel FR, Zhou P. Vaccine. 2009 Nov 12;27(48):6777-90. doi: 10.1016/j.vaccine.2009.08.056. Epub 2009 Sep 2.

Influenza activity in Cambodia during 2006-2008. Mardy S, Ly S, Heng S, Vong S, Huch C, Nora C, Asgari N, Miller M, Bergeri I, Rehmet  S, Duong V, Zhou W, Kasai T, Touch S, Buchy P. BMC Infect Dis. 2009 Oct 15;9:168. doi: 10.1186/1471-2334-9-168.

Molecular epidemiology of clade 1 influenza A viruses (H5N1), Southern Indochina Peninsula, 2004-2007. Buchy P, Fourment M, Mardy S, Sorn S, Holl D, Ly S, Vong S, Enouf V, Peiris J.S.M., van der Werf S. Emerg Infect Dis. 2009 Oct;15(10):1641-4. doi: 10.3201/eid1510.090115.

Rabies situation in Cambodia. Ly S., Buchy P, Heng NY, Ong S, Chhor N, Bourhy H, Vong S. PLoS Neglected Tropical Diseases. 2009 Sep 8;3(9):e511. doi: 10.1371/journal.pntd.0000511.

Prevalence, risk factors, and impact on outcome of cytomegalovirus replication in serum of Cambodian HIV-infected patients (2004-2007). Micol R, Buchy P, Guerrier G, Duong V, Ferradini L, Dousset JP, Guérin PJ, Balkan S, Galimand J, Chanroeun H, Lortholary O, Rouzioux C, Fontanet A, Leruez-Ville M. J Acquir Immune Dedic Syndr. 2009 Aug 1;51(4):486-91. doi: 10.1097/QAI.0b013e3181a254c2.

Dengue and other arboviral diseases in South-East Asia. Duong V, Vong S, Buchy P. Med Trop. 2009 Aug;69(4):339-44.

Emergence and spread of oseltamivir-resistant (H1N1) influenza viruses in Oceania, South-East Asia and South Africa. Hurt AC, Ernest J, Deng YM, Ianello P, Bessalaar TG, Birch C, Buchy P, Chittaganpitch M, Chiu SC,  Dwyer D, Guigon A, Harrower B, Kei IP, Kok T, Lin C, McPhie K, Mohd A, Olveda R, Panayotou T, Rawlinson W, Scott L, Smith D, D’Souza H, Komadina N, Shaw R, Kelso A, Barr IG.  Antiviral Res. 2009 Jul;83(1):90-3. doi: 10.1016/j.antiviral.2009.03.003. Epub 2009 Mar 24.

Quantitative analysis of nucleic acid hybridization on magnetic particles and quantum dot-based probes. Lim SH, Bestvater F, Buchy P, Mardy S, Yu ADC.  Sensors. 2009;9(7):5590-9. doi: 10.3390/s90705590. Epub 2009 Jul 14.

H5N1 evolution in South East Asia. Gutierrez RA, Naughtin MJ, Horm SV, San S, Buchy P. Viruses. 2009, 1(3), 335-361; doi:10.3390/v1030335.

Rodent-borne zoonotic viruses in Southeast Asia. Blasdell K, Herbreteau V, Henttonen H, Phonekeo D, Hugot JP, Buchy P.  Kasetsart J. (Nat. Sci.). 2009. 43:94-105.

No association between HHV-6 reactivation and cryptococcosis in HIV-infected Patients.  Micol R, Buchy P, Guerrier G, Galimand J, Duong V, Ferradini L, Balkan S, Guérin PJ, Martin PR, Fontanet A, Lortholary O, Rouzioux C, Leruez-Ville M. J Med Microbiol. 2009, 58:276-7.

Risk factors associated with avian influenza A (H5N1) transmission from birds and asymptomatic H5N1 virus infection, Cambodia, 2006. Vong S, Ly S, Van Kherkove MD, Achenbach J, Holl D, Sorn S, Buchy P, Heng S, Uyeki TM, Sok T, Katz JM. J Infect Dis.(2009) 199 (12): 1744-1752. doi: 10.1086/599208

Design of multiplexed detection assays for identification of avian influenza A virus subtypes pathogenic to humans by SmartCycler real-time reverse transcription-PCR Wang W, Ren P, Mardi S, Hou L, Tsai C, Chan KH, Cheng P, Sheng J, Buchy P, Sun B, Toyoda T, Lim W, Peiris M, Zhou P, Deubel V.  J Clin Microbiol. 2009 Jan;47(1):86-92. doi: 10.1128/JCM.01090-08. Epub 2008 Oct 29.

A reliable diagnosis of human rabies based on skin biopsy specimens. Dacheux L, Reynes JM, Buchy P, Ong S, Diop BM, Rousset D, Rathat C, Jolly N, Dufourcq JB, Nareth C, Diop S, Iehlé C, Rajerison R, Sadorge C, Bourhy H. . Henttonen H, Buchy P, Suputtamongkol Y, Jittapalapong S, Herbreteau V, Laakkonen J, Chaval Y, Galan M, Dobigny G, Charbonnel N, Michaux J, Cosson JF, Morand S, Hugot JP.  Ann. N.Y. Acad. Sci. 2008 Dec;1149:84-9. doi: 10.1196/annals.1428.064.

Recent discoveries of new Hantaviruses widen their range and question their origins. Henttonen H, Buchy P, Suputtamongkol Y, Jittapalapong S, Herbreteau V, Laakkonen J, Chaval Y, Galan M, Dobigny G, Charbonnel N, Michaux J, Cosson JF, Morand S, Hugot JP. Ann. N.Y. Acad. Sci. 2008 Dec;1149:84-9. doi: 10.1196/annals.1428.064.

Environmental contamination during influenza A virus (H5N1) outbreaks, Cambodia, 2006. Vong S, Ly S, Mardy S, Holl D, Buchy P.  Emerg Infect Dis. 2008 Aug;14(8):1303-5. doi: 10.3201/eid1408.070912.

Asia: avian influenza H5N1. Kruy SL, Buisson Y, Buchy P. Bull Soc Pathol Exot. 2008, 101:238-242.

Influenza A/H5N1 virus infection in humans in Cambodia. Buchy P, Mardy S, Vong S, Toyoda T, Aubin JT,  Miller M, Touch S, Sovann L, Dufourcq JB, Richner B, Tu PV, Tien NT, Lim W, Peiris JS, Van der Werf S. Journal of Clinical Virology. 2007 Jul;39(3):164-8. Epub 2007 May 29.

Hemagglutinin pseudotyped lentiviral particles: characterization of a new method for avian H5N1 influenza sero-diagnosis. Nefkens I, Garcia JM, Ling CS, Lagarde N, Nicholls J, Tang DJ, Peiris M, Buchy P, Altmeyer R.  Journal of Clinical Virology. 2007 May;39(1):27-33. Epub 2007 Apr 3.

Influenza A (H5N1): situation in the world and specific example of Cambodia. Buchy P.  Bull Soc Fr Microbiol. 2007, 22:155-163.

Natural variation can significantly alter the sensitivity of Influenza A(H5N1) viruses to oseltamivir. Rameix-Welti MA, Agou F, Buchy P, Mardy S, Aubin JT, Véron M, van der Werf S, Naffakh N.  Antimicrob Agents Chemother. 2006 Nov;50(11):3809-15. Epub 2006 Aug 28.

Low frequency of avian-to-human transmission of H5N1 in southern Cambodia, 2005. Vong S, Coghlan B, Mardy S, Holl D, Seng H, Ly S, Miller M, Buchy P, Froehlich Y, Dufourcq JB, Uyeki T, Lim W, Sok T.  Emerg Infect Dis. 2006, 12.

Reference clinical analysis laboratory in tropical area: Example of the Reseau International des Instituts Pasteur. Buchy P, Monchy D, Garin B, Combe P, Mauclere P, Buisson Y.  Rev. Fr. Lab. 2005, 372: 21-26.

Evolution of H5N1 Avian Influenza Viruses in Asia. The World Health Organization Global Influenza Program Surveillance Network. Emerg Infect Dis. 2005, 11(10): 1515-21.

Secondary Dengue virus type 4 infections in Vietnam. Buchy P, Vo VL, Bui KT, Trinh TX, Glaziou P, Le TT, Le VL, Bui TC. Southeast Asian J Trop Med Public Health. 2005 Jan;36(1):178-85.

Prevalence of hepatitis A, B, C and E virus markers among patients with elevated levels of Alanine aminotransferase and Aspartate aminotransferase in Phnom Penh (Cambodia) and Nha Trang (Central Vietnam). Buchy P, Monchy D, An TT, Srey CT, Tri DV, Son S, Glaziou P, Chien BT. Bull Soc Pathol Exot. 2004 Aug;97(3):165-71.